Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17197 | 51814;51815;51816 | chr2:178609834;178609833;178609832 | chr2:179474561;179474560;179474559 |
N2AB | 15556 | 46891;46892;46893 | chr2:178609834;178609833;178609832 | chr2:179474561;179474560;179474559 |
N2A | 14629 | 44110;44111;44112 | chr2:178609834;178609833;178609832 | chr2:179474561;179474560;179474559 |
N2B | 8132 | 24619;24620;24621 | chr2:178609834;178609833;178609832 | chr2:179474561;179474560;179474559 |
Novex-1 | 8257 | 24994;24995;24996 | chr2:178609834;178609833;178609832 | chr2:179474561;179474560;179474559 |
Novex-2 | 8324 | 25195;25196;25197 | chr2:178609834;178609833;178609832 | chr2:179474561;179474560;179474559 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | None | None | 0.999 | N | 0.759 | 0.39 | 0.621043220472 | gnomAD-4.0.0 | 1.36894E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.52029E-05 | None | 0 | 0 | 8.99797E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.7039 | likely_pathogenic | 0.6873 | pathogenic | -1.842 | Destabilizing | 0.964 | D | 0.429 | neutral | None | None | None | None | I |
C/D | 0.9899 | likely_pathogenic | 0.9878 | pathogenic | -0.478 | Destabilizing | 0.999 | D | 0.772 | deleterious | None | None | None | None | I |
C/E | 0.9894 | likely_pathogenic | 0.9869 | pathogenic | -0.345 | Destabilizing | 0.999 | D | 0.778 | deleterious | None | None | None | None | I |
C/F | 0.7342 | likely_pathogenic | 0.7394 | pathogenic | -1.16 | Destabilizing | 0.997 | D | 0.748 | deleterious | N | 0.521671036 | None | None | I |
C/G | 0.7417 | likely_pathogenic | 0.7171 | pathogenic | -2.172 | Highly Destabilizing | 0.999 | D | 0.709 | prob.delet. | N | 0.475354803 | None | None | I |
C/H | 0.9702 | likely_pathogenic | 0.9674 | pathogenic | -2.13 | Highly Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | I |
C/I | 0.6019 | likely_pathogenic | 0.5742 | pathogenic | -0.981 | Destabilizing | 0.971 | D | 0.503 | neutral | None | None | None | None | I |
C/K | 0.9955 | likely_pathogenic | 0.9942 | pathogenic | -1.047 | Destabilizing | 0.999 | D | 0.751 | deleterious | None | None | None | None | I |
C/L | 0.6939 | likely_pathogenic | 0.7045 | pathogenic | -0.981 | Destabilizing | 0.931 | D | 0.517 | neutral | None | None | None | None | I |
C/M | 0.8315 | likely_pathogenic | 0.8234 | pathogenic | 0.062 | Stabilizing | 0.998 | D | 0.694 | prob.neutral | None | None | None | None | I |
C/N | 0.9541 | likely_pathogenic | 0.9481 | pathogenic | -1.176 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | I |
C/P | 0.9924 | likely_pathogenic | 0.9923 | pathogenic | -1.243 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | I |
C/Q | 0.9754 | likely_pathogenic | 0.9703 | pathogenic | -0.985 | Destabilizing | 0.999 | D | 0.77 | deleterious | None | None | None | None | I |
C/R | 0.972 | likely_pathogenic | 0.966 | pathogenic | -0.99 | Destabilizing | 0.999 | D | 0.779 | deleterious | N | 0.491520047 | None | None | I |
C/S | 0.7538 | likely_pathogenic | 0.7445 | pathogenic | -1.708 | Destabilizing | 0.99 | D | 0.605 | neutral | N | 0.513283626 | None | None | I |
C/T | 0.7758 | likely_pathogenic | 0.7668 | pathogenic | -1.382 | Destabilizing | 0.985 | D | 0.563 | neutral | None | None | None | None | I |
C/V | 0.4524 | ambiguous | 0.4189 | ambiguous | -1.243 | Destabilizing | 0.469 | N | 0.358 | neutral | None | None | None | None | I |
C/W | 0.9389 | likely_pathogenic | 0.9405 | pathogenic | -1.19 | Destabilizing | 1.0 | D | 0.74 | deleterious | N | 0.505829321 | None | None | I |
C/Y | 0.8838 | likely_pathogenic | 0.8813 | pathogenic | -1.173 | Destabilizing | 0.999 | D | 0.759 | deleterious | N | 0.520903031 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.