Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17200 | 51823;51824;51825 | chr2:178609825;178609824;178609823 | chr2:179474552;179474551;179474550 |
N2AB | 15559 | 46900;46901;46902 | chr2:178609825;178609824;178609823 | chr2:179474552;179474551;179474550 |
N2A | 14632 | 44119;44120;44121 | chr2:178609825;178609824;178609823 | chr2:179474552;179474551;179474550 |
N2B | 8135 | 24628;24629;24630 | chr2:178609825;178609824;178609823 | chr2:179474552;179474551;179474550 |
Novex-1 | 8260 | 25003;25004;25005 | chr2:178609825;178609824;178609823 | chr2:179474552;179474551;179474550 |
Novex-2 | 8327 | 25204;25205;25206 | chr2:178609825;178609824;178609823 | chr2:179474552;179474551;179474550 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Y | rs2055879782 | None | None | N | 0.082 | 0.168 | 0.207176502487 | gnomAD-3.1.2 | 6.59E-06 | None | None | None | None | I | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
H/Y | rs2055879782 | None | None | N | 0.082 | 0.168 | 0.207176502487 | gnomAD-4.0.0 | 2.03065E-06 | None | None | None | None | I | None | 1.74941E-05 | 0 | None | 0 | 0 | None | 0 | 5.16529E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.2816 | likely_benign | 0.3048 | benign | 0.408 | Stabilizing | 0.025 | N | 0.181 | neutral | None | None | None | None | I |
H/C | 0.2842 | likely_benign | 0.2712 | benign | 0.528 | Stabilizing | 0.859 | D | 0.228 | neutral | None | None | None | None | I |
H/D | 0.2806 | likely_benign | 0.2871 | benign | -0.18 | Destabilizing | 0.175 | N | 0.287 | neutral | N | 0.398208681 | None | None | I |
H/E | 0.3465 | ambiguous | 0.3528 | ambiguous | -0.186 | Destabilizing | 0.104 | N | 0.14 | neutral | None | None | None | None | I |
H/F | 0.2271 | likely_benign | 0.2319 | benign | 0.816 | Stabilizing | None | N | 0.074 | neutral | None | None | None | None | I |
H/G | 0.3548 | ambiguous | 0.3798 | ambiguous | 0.21 | Stabilizing | 0.055 | N | 0.171 | neutral | None | None | None | None | I |
H/I | 0.3217 | likely_benign | 0.3271 | benign | 0.884 | Stabilizing | 0.055 | N | 0.271 | neutral | None | None | None | None | I |
H/K | 0.3055 | likely_benign | 0.3102 | benign | 0.322 | Stabilizing | 0.104 | N | 0.27 | neutral | None | None | None | None | I |
H/L | 0.1987 | likely_benign | 0.2022 | benign | 0.884 | Stabilizing | 0.019 | N | 0.231 | neutral | N | 0.428398302 | None | None | I |
H/M | 0.3977 | ambiguous | 0.3996 | ambiguous | 0.594 | Stabilizing | 0.667 | D | 0.254 | neutral | None | None | None | None | I |
H/N | 0.0989 | likely_benign | 0.1008 | benign | 0.221 | Stabilizing | 0.081 | N | 0.158 | neutral | N | 0.396709958 | None | None | I |
H/P | 0.5747 | likely_pathogenic | 0.5712 | pathogenic | 0.748 | Stabilizing | 0.301 | N | 0.351 | neutral | N | 0.432222467 | None | None | I |
H/Q | 0.1887 | likely_benign | 0.1855 | benign | 0.26 | Stabilizing | 0.301 | N | 0.237 | neutral | N | 0.426782149 | None | None | I |
H/R | 0.1764 | likely_benign | 0.1693 | benign | -0.096 | Destabilizing | 0.175 | N | 0.18 | neutral | N | 0.409465825 | None | None | I |
H/S | 0.2047 | likely_benign | 0.2233 | benign | 0.328 | Stabilizing | 0.002 | N | 0.099 | neutral | None | None | None | None | I |
H/T | 0.2209 | likely_benign | 0.2356 | benign | 0.41 | Stabilizing | 0.055 | N | 0.227 | neutral | None | None | None | None | I |
H/V | 0.2389 | likely_benign | 0.2449 | benign | 0.748 | Stabilizing | 0.055 | N | 0.233 | neutral | None | None | None | None | I |
H/W | 0.4455 | ambiguous | 0.4548 | ambiguous | 0.676 | Stabilizing | 0.667 | D | 0.239 | neutral | None | None | None | None | I |
H/Y | 0.0979 | likely_benign | 0.0987 | benign | 0.965 | Stabilizing | None | N | 0.082 | neutral | N | 0.421645688 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.