Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17202 | 51829;51830;51831 | chr2:178609819;178609818;178609817 | chr2:179474546;179474545;179474544 |
N2AB | 15561 | 46906;46907;46908 | chr2:178609819;178609818;178609817 | chr2:179474546;179474545;179474544 |
N2A | 14634 | 44125;44126;44127 | chr2:178609819;178609818;178609817 | chr2:179474546;179474545;179474544 |
N2B | 8137 | 24634;24635;24636 | chr2:178609819;178609818;178609817 | chr2:179474546;179474545;179474544 |
Novex-1 | 8262 | 25009;25010;25011 | chr2:178609819;178609818;178609817 | chr2:179474546;179474545;179474544 |
Novex-2 | 8329 | 25210;25211;25212 | chr2:178609819;178609818;178609817 | chr2:179474546;179474545;179474544 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | 1.0 | N | 0.806 | 0.516 | 0.812812526149 | gnomAD-4.0.0 | 1.36893E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79959E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.842 | likely_pathogenic | 0.8394 | pathogenic | -1.295 | Destabilizing | 0.999 | D | 0.605 | neutral | N | 0.519614952 | None | None | N |
V/C | 0.9397 | likely_pathogenic | 0.9415 | pathogenic | -0.475 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
V/D | 0.989 | likely_pathogenic | 0.9874 | pathogenic | -2.094 | Highly Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
V/E | 0.9499 | likely_pathogenic | 0.9468 | pathogenic | -1.823 | Destabilizing | 1.0 | D | 0.775 | deleterious | N | 0.502777901 | None | None | N |
V/F | 0.7659 | likely_pathogenic | 0.7602 | pathogenic | -0.749 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
V/G | 0.9455 | likely_pathogenic | 0.9381 | pathogenic | -1.841 | Destabilizing | 1.0 | D | 0.806 | deleterious | N | 0.508456596 | None | None | N |
V/H | 0.9806 | likely_pathogenic | 0.9788 | pathogenic | -1.901 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
V/I | 0.1176 | likely_benign | 0.117 | benign | 0.246 | Stabilizing | 0.997 | D | 0.54 | neutral | N | 0.475845532 | None | None | N |
V/K | 0.9671 | likely_pathogenic | 0.9611 | pathogenic | -0.905 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
V/L | 0.5561 | ambiguous | 0.5727 | pathogenic | 0.246 | Stabilizing | 0.997 | D | 0.597 | neutral | N | 0.506283083 | None | None | N |
V/M | 0.6555 | likely_pathogenic | 0.6686 | pathogenic | 0.231 | Stabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
V/N | 0.9585 | likely_pathogenic | 0.9549 | pathogenic | -1.432 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
V/P | 0.9824 | likely_pathogenic | 0.9775 | pathogenic | -0.243 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
V/Q | 0.9342 | likely_pathogenic | 0.927 | pathogenic | -1.139 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
V/R | 0.951 | likely_pathogenic | 0.9407 | pathogenic | -1.098 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
V/S | 0.9107 | likely_pathogenic | 0.9083 | pathogenic | -1.924 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
V/T | 0.8452 | likely_pathogenic | 0.8569 | pathogenic | -1.502 | Destabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | N |
V/W | 0.994 | likely_pathogenic | 0.9933 | pathogenic | -1.394 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
V/Y | 0.968 | likely_pathogenic | 0.9648 | pathogenic | -0.844 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.