Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17203 | 51832;51833;51834 | chr2:178609816;178609815;178609814 | chr2:179474543;179474542;179474541 |
N2AB | 15562 | 46909;46910;46911 | chr2:178609816;178609815;178609814 | chr2:179474543;179474542;179474541 |
N2A | 14635 | 44128;44129;44130 | chr2:178609816;178609815;178609814 | chr2:179474543;179474542;179474541 |
N2B | 8138 | 24637;24638;24639 | chr2:178609816;178609815;178609814 | chr2:179474543;179474542;179474541 |
Novex-1 | 8263 | 25012;25013;25014 | chr2:178609816;178609815;178609814 | chr2:179474543;179474542;179474541 |
Novex-2 | 8330 | 25213;25214;25215 | chr2:178609816;178609815;178609814 | chr2:179474543;179474542;179474541 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs1559763601 | None | 1.0 | N | 0.747 | 0.419 | 0.347879110917 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.4863 | ambiguous | 0.5052 | ambiguous | -0.788 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | N | 0.489406689 | None | None | I |
P/C | 0.9584 | likely_pathogenic | 0.9602 | pathogenic | -0.859 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | I |
P/D | 0.8431 | likely_pathogenic | 0.8518 | pathogenic | -0.34 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
P/E | 0.7859 | likely_pathogenic | 0.789 | pathogenic | -0.369 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | I |
P/F | 0.9775 | likely_pathogenic | 0.9789 | pathogenic | -0.583 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | I |
P/G | 0.7157 | likely_pathogenic | 0.7103 | pathogenic | -1.019 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | I |
P/H | 0.7077 | likely_pathogenic | 0.7238 | pathogenic | -0.348 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | I |
P/I | 0.9611 | likely_pathogenic | 0.9649 | pathogenic | -0.288 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | I |
P/K | 0.8464 | likely_pathogenic | 0.8512 | pathogenic | -0.722 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
P/L | 0.7279 | likely_pathogenic | 0.7508 | pathogenic | -0.288 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | N | 0.469443 | None | None | I |
P/M | 0.9226 | likely_pathogenic | 0.9314 | pathogenic | -0.493 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | I |
P/N | 0.7537 | likely_pathogenic | 0.7597 | pathogenic | -0.677 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
P/Q | 0.6234 | likely_pathogenic | 0.6374 | pathogenic | -0.797 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | N | 0.510744753 | None | None | I |
P/R | 0.7334 | likely_pathogenic | 0.7378 | pathogenic | -0.242 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | N | 0.493583144 | None | None | I |
P/S | 0.4894 | ambiguous | 0.5061 | ambiguous | -1.142 | Destabilizing | 1.0 | D | 0.747 | deleterious | N | 0.454275395 | None | None | I |
P/T | 0.5731 | likely_pathogenic | 0.6026 | pathogenic | -1.055 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | N | 0.455734045 | None | None | I |
P/V | 0.8953 | likely_pathogenic | 0.9037 | pathogenic | -0.419 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
P/W | 0.9792 | likely_pathogenic | 0.9803 | pathogenic | -0.713 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
P/Y | 0.9504 | likely_pathogenic | 0.9502 | pathogenic | -0.416 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.