Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17209 | 51850;51851;51852 | chr2:178609798;178609797;178609796 | chr2:179474525;179474524;179474523 |
N2AB | 15568 | 46927;46928;46929 | chr2:178609798;178609797;178609796 | chr2:179474525;179474524;179474523 |
N2A | 14641 | 44146;44147;44148 | chr2:178609798;178609797;178609796 | chr2:179474525;179474524;179474523 |
N2B | 8144 | 24655;24656;24657 | chr2:178609798;178609797;178609796 | chr2:179474525;179474524;179474523 |
Novex-1 | 8269 | 25030;25031;25032 | chr2:178609798;178609797;178609796 | chr2:179474525;179474524;179474523 |
Novex-2 | 8336 | 25231;25232;25233 | chr2:178609798;178609797;178609796 | chr2:179474525;179474524;179474523 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs1292930837 | None | 0.324 | N | 0.675 | 0.175 | None | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
A/T | rs1292930837 | None | 0.324 | N | 0.675 | 0.175 | None | gnomAD-4.0.0 | 6.82061E-06 | None | None | None | None | N | None | 6.68342E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 5.08812E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3882 | ambiguous | 0.4418 | ambiguous | -0.844 | Destabilizing | 0.944 | D | 0.707 | prob.neutral | None | None | None | None | N |
A/D | 0.9234 | likely_pathogenic | 0.9439 | pathogenic | -1.662 | Destabilizing | 0.818 | D | 0.783 | deleterious | None | None | None | None | N |
A/E | 0.7917 | likely_pathogenic | 0.8268 | pathogenic | -1.527 | Destabilizing | 0.492 | N | 0.767 | deleterious | N | 0.489158759 | None | None | N |
A/F | 0.6228 | likely_pathogenic | 0.6937 | pathogenic | -0.699 | Destabilizing | 0.69 | D | 0.801 | deleterious | None | None | None | None | N |
A/G | 0.4765 | ambiguous | 0.4891 | ambiguous | -1.333 | Destabilizing | 0.492 | N | 0.687 | prob.neutral | N | 0.500029114 | None | None | N |
A/H | 0.896 | likely_pathogenic | 0.9284 | pathogenic | -1.783 | Destabilizing | 0.981 | D | 0.807 | deleterious | None | None | None | None | N |
A/I | 0.209 | likely_benign | 0.2333 | benign | 0.211 | Stabilizing | 0.043 | N | 0.668 | neutral | None | None | None | None | N |
A/K | 0.9344 | likely_pathogenic | 0.9428 | pathogenic | -1.185 | Destabilizing | 0.563 | D | 0.778 | deleterious | None | None | None | None | N |
A/L | 0.2489 | likely_benign | 0.2999 | benign | 0.211 | Stabilizing | 0.116 | N | 0.645 | neutral | None | None | None | None | N |
A/M | 0.3345 | likely_benign | 0.3905 | ambiguous | 0.116 | Stabilizing | 0.69 | D | 0.773 | deleterious | None | None | None | None | N |
A/N | 0.8145 | likely_pathogenic | 0.8603 | pathogenic | -1.229 | Destabilizing | 0.932 | D | 0.809 | deleterious | None | None | None | None | N |
A/P | 0.8964 | likely_pathogenic | 0.9058 | pathogenic | -0.113 | Destabilizing | 0.912 | D | 0.791 | deleterious | N | 0.489158759 | None | None | N |
A/Q | 0.7871 | likely_pathogenic | 0.8246 | pathogenic | -1.122 | Destabilizing | 0.932 | D | 0.788 | deleterious | None | None | None | None | N |
A/R | 0.8916 | likely_pathogenic | 0.9056 | pathogenic | -1.186 | Destabilizing | 0.818 | D | 0.793 | deleterious | None | None | None | None | N |
A/S | 0.2142 | likely_benign | 0.2425 | benign | -1.657 | Destabilizing | 0.324 | N | 0.679 | prob.neutral | N | 0.462241517 | None | None | N |
A/T | 0.1437 | likely_benign | 0.157 | benign | -1.393 | Destabilizing | 0.324 | N | 0.675 | neutral | N | 0.46591654 | None | None | N |
A/V | 0.0897 | likely_benign | 0.0979 | benign | -0.113 | Destabilizing | None | N | 0.3 | neutral | N | 0.285323106 | None | None | N |
A/W | 0.9464 | likely_pathogenic | 0.963 | pathogenic | -1.384 | Destabilizing | 0.981 | D | 0.819 | deleterious | None | None | None | None | N |
A/Y | 0.829 | likely_pathogenic | 0.8712 | pathogenic | -0.807 | Destabilizing | 0.818 | D | 0.812 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.