Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1721 | 5386;5387;5388 | chr2:178776703;178776702;178776701 | chr2:179641430;179641429;179641428 |
N2AB | 1721 | 5386;5387;5388 | chr2:178776703;178776702;178776701 | chr2:179641430;179641429;179641428 |
N2A | 1721 | 5386;5387;5388 | chr2:178776703;178776702;178776701 | chr2:179641430;179641429;179641428 |
N2B | 1675 | 5248;5249;5250 | chr2:178776703;178776702;178776701 | chr2:179641430;179641429;179641428 |
Novex-1 | 1675 | 5248;5249;5250 | chr2:178776703;178776702;178776701 | chr2:179641430;179641429;179641428 |
Novex-2 | 1675 | 5248;5249;5250 | chr2:178776703;178776702;178776701 | chr2:179641430;179641429;179641428 |
Novex-3 | 1721 | 5386;5387;5388 | chr2:178776703;178776702;178776701 | chr2:179641430;179641429;179641428 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | rs1460034754 | -0.372 | 1.0 | N | 0.676 | 0.584 | 0.368554958709 | gnomAD-2.1.1 | 3.99E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.45E-05 | None | 0 | None | 0 | 0 | 0 |
H/R | rs1460034754 | -0.372 | 1.0 | N | 0.676 | 0.584 | 0.368554958709 | gnomAD-4.0.0 | 2.7364E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69789E-06 | 1.15931E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.7041 | likely_pathogenic | 0.691 | pathogenic | -0.465 | Destabilizing | 0.999 | D | 0.63 | neutral | None | None | None | None | I |
H/C | 0.4844 | ambiguous | 0.5186 | ambiguous | 0.155 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
H/D | 0.7938 | likely_pathogenic | 0.7874 | pathogenic | -0.267 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | D | 0.587794784 | None | None | I |
H/E | 0.759 | likely_pathogenic | 0.7346 | pathogenic | -0.181 | Destabilizing | 0.999 | D | 0.575 | neutral | None | None | None | None | I |
H/F | 0.6428 | likely_pathogenic | 0.6337 | pathogenic | 0.645 | Stabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
H/G | 0.7728 | likely_pathogenic | 0.7798 | pathogenic | -0.822 | Destabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | I |
H/I | 0.7102 | likely_pathogenic | 0.7058 | pathogenic | 0.503 | Stabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | I |
H/K | 0.5858 | likely_pathogenic | 0.5594 | ambiguous | -0.31 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | I |
H/L | 0.3803 | ambiguous | 0.3874 | ambiguous | 0.503 | Stabilizing | 1.0 | D | 0.685 | prob.neutral | D | 0.535318862 | None | None | I |
H/M | 0.827 | likely_pathogenic | 0.8206 | pathogenic | 0.269 | Stabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
H/N | 0.3065 | likely_benign | 0.3118 | benign | -0.441 | Destabilizing | 0.999 | D | 0.581 | neutral | D | 0.564477325 | None | None | I |
H/P | 0.8683 | likely_pathogenic | 0.8845 | pathogenic | 0.203 | Stabilizing | 1.0 | D | 0.684 | prob.neutral | D | 0.712985528 | None | None | I |
H/Q | 0.4506 | ambiguous | 0.4361 | ambiguous | -0.234 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | D | 0.538681203 | None | None | I |
H/R | 0.2357 | likely_benign | 0.2184 | benign | -0.831 | Destabilizing | 1.0 | D | 0.676 | prob.neutral | N | 0.498877913 | None | None | I |
H/S | 0.5337 | ambiguous | 0.5218 | ambiguous | -0.476 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | I |
H/T | 0.6069 | likely_pathogenic | 0.5956 | pathogenic | -0.275 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
H/V | 0.6164 | likely_pathogenic | 0.6177 | pathogenic | 0.203 | Stabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
H/W | 0.748 | likely_pathogenic | 0.7452 | pathogenic | 0.904 | Stabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | I |
H/Y | 0.2839 | likely_benign | 0.285 | benign | 1.016 | Stabilizing | 0.999 | D | 0.589 | neutral | D | 0.61140737 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.