Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17213 | 51862;51863;51864 | chr2:178609786;178609785;178609784 | chr2:179474513;179474512;179474511 |
N2AB | 15572 | 46939;46940;46941 | chr2:178609786;178609785;178609784 | chr2:179474513;179474512;179474511 |
N2A | 14645 | 44158;44159;44160 | chr2:178609786;178609785;178609784 | chr2:179474513;179474512;179474511 |
N2B | 8148 | 24667;24668;24669 | chr2:178609786;178609785;178609784 | chr2:179474513;179474512;179474511 |
Novex-1 | 8273 | 25042;25043;25044 | chr2:178609786;178609785;178609784 | chr2:179474513;179474512;179474511 |
Novex-2 | 8340 | 25243;25244;25245 | chr2:178609786;178609785;178609784 | chr2:179474513;179474512;179474511 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 0.92 | N | 0.427 | 0.178 | 0.329282125956 | gnomAD-4.0.0 | 8.21406E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.0798E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1445 | likely_benign | 0.1418 | benign | -0.42 | Destabilizing | 0.826 | D | 0.426 | neutral | N | 0.493335215 | None | None | N |
E/C | 0.7651 | likely_pathogenic | 0.7459 | pathogenic | -0.312 | Destabilizing | 0.999 | D | 0.464 | neutral | None | None | None | None | N |
E/D | 0.2115 | likely_benign | 0.1935 | benign | -0.567 | Destabilizing | 0.906 | D | 0.399 | neutral | N | 0.473749377 | None | None | N |
E/F | 0.7294 | likely_pathogenic | 0.716 | pathogenic | 0.111 | Stabilizing | 0.997 | D | 0.449 | neutral | None | None | None | None | N |
E/G | 0.258 | likely_benign | 0.2374 | benign | -0.683 | Destabilizing | 0.959 | D | 0.437 | neutral | N | 0.486754469 | None | None | N |
E/H | 0.4209 | ambiguous | 0.4095 | ambiguous | 0.481 | Stabilizing | 0.997 | D | 0.387 | neutral | None | None | None | None | N |
E/I | 0.2049 | likely_benign | 0.2045 | benign | 0.263 | Stabilizing | 0.982 | D | 0.451 | neutral | None | None | None | None | N |
E/K | 0.1273 | likely_benign | 0.1267 | benign | 0.279 | Stabilizing | 0.134 | N | 0.176 | neutral | N | 0.4100819 | None | None | N |
E/L | 0.2672 | likely_benign | 0.2584 | benign | 0.263 | Stabilizing | 0.939 | D | 0.431 | neutral | None | None | None | None | N |
E/M | 0.3533 | ambiguous | 0.3448 | ambiguous | 0.239 | Stabilizing | 0.999 | D | 0.433 | neutral | None | None | None | None | N |
E/N | 0.3183 | likely_benign | 0.3003 | benign | -0.421 | Destabilizing | 0.969 | D | 0.405 | neutral | None | None | None | None | N |
E/P | 0.7602 | likely_pathogenic | 0.7323 | pathogenic | 0.056 | Stabilizing | 0.997 | D | 0.418 | neutral | None | None | None | None | N |
E/Q | 0.1163 | likely_benign | 0.1163 | benign | -0.309 | Destabilizing | 0.92 | D | 0.427 | neutral | N | 0.474594739 | None | None | N |
E/R | 0.2139 | likely_benign | 0.216 | benign | 0.67 | Stabilizing | 0.884 | D | 0.403 | neutral | None | None | None | None | N |
E/S | 0.2122 | likely_benign | 0.2093 | benign | -0.556 | Destabilizing | 0.759 | D | 0.409 | neutral | None | None | None | None | N |
E/T | 0.1462 | likely_benign | 0.1479 | benign | -0.315 | Destabilizing | 0.079 | N | 0.162 | neutral | None | None | None | None | N |
E/V | 0.1231 | likely_benign | 0.1224 | benign | 0.056 | Stabilizing | 0.92 | D | 0.434 | neutral | N | 0.449333722 | None | None | N |
E/W | 0.881 | likely_pathogenic | 0.867 | pathogenic | 0.391 | Stabilizing | 0.999 | D | 0.553 | neutral | None | None | None | None | N |
E/Y | 0.6361 | likely_pathogenic | 0.6024 | pathogenic | 0.401 | Stabilizing | 0.997 | D | 0.45 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.