Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17225 | 51898;51899;51900 | chr2:178609750;178609749;178609748 | chr2:179474477;179474476;179474475 |
N2AB | 15584 | 46975;46976;46977 | chr2:178609750;178609749;178609748 | chr2:179474477;179474476;179474475 |
N2A | 14657 | 44194;44195;44196 | chr2:178609750;178609749;178609748 | chr2:179474477;179474476;179474475 |
N2B | 8160 | 24703;24704;24705 | chr2:178609750;178609749;178609748 | chr2:179474477;179474476;179474475 |
Novex-1 | 8285 | 25078;25079;25080 | chr2:178609750;178609749;178609748 | chr2:179474477;179474476;179474475 |
Novex-2 | 8352 | 25279;25280;25281 | chr2:178609750;178609749;178609748 | chr2:179474477;179474476;179474475 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.999 | N | 0.483 | 0.363 | 0.357724736475 | gnomAD-4.0.0 | 6.84727E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00071E-07 | 0 | 0 |
E/Q | rs2154198655 | None | 1.0 | N | 0.629 | 0.247 | 0.335414705075 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 3.16456E-03 | 0 | 0 | 0 |
E/Q | rs2154198655 | None | 1.0 | N | 0.629 | 0.247 | 0.335414705075 | gnomAD-4.0.0 | 6.57704E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 3.40136E-03 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.6642 | likely_pathogenic | 0.5865 | pathogenic | -1.003 | Destabilizing | 0.999 | D | 0.678 | prob.neutral | N | 0.467530443 | None | None | I |
E/C | 0.9772 | likely_pathogenic | 0.9669 | pathogenic | -0.71 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
E/D | 0.9171 | likely_pathogenic | 0.9118 | pathogenic | -1.617 | Destabilizing | 0.999 | D | 0.483 | neutral | N | 0.500993929 | None | None | I |
E/F | 0.9772 | likely_pathogenic | 0.9649 | pathogenic | -0.795 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | I |
E/G | 0.869 | likely_pathogenic | 0.8182 | pathogenic | -1.397 | Destabilizing | 1.0 | D | 0.763 | deleterious | N | 0.491777217 | None | None | I |
E/H | 0.9489 | likely_pathogenic | 0.925 | pathogenic | -1.102 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | I |
E/I | 0.7692 | likely_pathogenic | 0.7081 | pathogenic | 0.088 | Stabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | I |
E/K | 0.6796 | likely_pathogenic | 0.5633 | ambiguous | -1.085 | Destabilizing | 0.999 | D | 0.545 | neutral | N | 0.520423029 | None | None | I |
E/L | 0.9004 | likely_pathogenic | 0.8672 | pathogenic | 0.088 | Stabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
E/M | 0.8399 | likely_pathogenic | 0.7974 | pathogenic | 0.685 | Stabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
E/N | 0.9505 | likely_pathogenic | 0.9429 | pathogenic | -1.46 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | I |
E/P | 0.9989 | likely_pathogenic | 0.9985 | pathogenic | -0.255 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
E/Q | 0.3988 | ambiguous | 0.3298 | benign | -1.266 | Destabilizing | 1.0 | D | 0.629 | neutral | N | 0.474531882 | None | None | I |
E/R | 0.8071 | likely_pathogenic | 0.7003 | pathogenic | -0.952 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
E/S | 0.8297 | likely_pathogenic | 0.8013 | pathogenic | -1.935 | Destabilizing | 0.999 | D | 0.586 | neutral | None | None | None | None | I |
E/T | 0.8294 | likely_pathogenic | 0.7849 | pathogenic | -1.587 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
E/V | 0.5643 | likely_pathogenic | 0.4779 | ambiguous | -0.255 | Destabilizing | 1.0 | D | 0.819 | deleterious | N | 0.434835911 | None | None | I |
E/W | 0.9945 | likely_pathogenic | 0.9912 | pathogenic | -0.78 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | I |
E/Y | 0.9718 | likely_pathogenic | 0.9588 | pathogenic | -0.588 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.