Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17226 | 51901;51902;51903 | chr2:178609747;178609746;178609745 | chr2:179474474;179474473;179474472 |
N2AB | 15585 | 46978;46979;46980 | chr2:178609747;178609746;178609745 | chr2:179474474;179474473;179474472 |
N2A | 14658 | 44197;44198;44199 | chr2:178609747;178609746;178609745 | chr2:179474474;179474473;179474472 |
N2B | 8161 | 24706;24707;24708 | chr2:178609747;178609746;178609745 | chr2:179474474;179474473;179474472 |
Novex-1 | 8286 | 25081;25082;25083 | chr2:178609747;178609746;178609745 | chr2:179474474;179474473;179474472 |
Novex-2 | 8353 | 25282;25283;25284 | chr2:178609747;178609746;178609745 | chr2:179474474;179474473;179474472 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs780947951 | -2.53 | 0.999 | D | 0.617 | 0.672 | 0.433047596574 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
N/D | rs780947951 | -2.53 | 0.999 | D | 0.617 | 0.672 | 0.433047596574 | gnomAD-4.0.0 | 1.59391E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4348E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9977 | likely_pathogenic | 0.998 | pathogenic | 0.287 | Stabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
N/C | 0.9876 | likely_pathogenic | 0.9897 | pathogenic | -0.056 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
N/D | 0.9946 | likely_pathogenic | 0.994 | pathogenic | -2.252 | Highly Destabilizing | 0.999 | D | 0.617 | neutral | D | 0.533081971 | None | None | N |
N/E | 0.9992 | likely_pathogenic | 0.999 | pathogenic | -2.115 | Highly Destabilizing | 0.999 | D | 0.739 | prob.delet. | None | None | None | None | N |
N/F | 0.9997 | likely_pathogenic | 0.9996 | pathogenic | 0.029 | Stabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
N/G | 0.9945 | likely_pathogenic | 0.9949 | pathogenic | 0.012 | Stabilizing | 0.999 | D | 0.577 | neutral | None | None | None | None | N |
N/H | 0.9948 | likely_pathogenic | 0.9947 | pathogenic | -0.002 | Destabilizing | 1.0 | D | 0.783 | deleterious | D | 0.545452235 | None | None | N |
N/I | 0.9965 | likely_pathogenic | 0.9964 | pathogenic | 0.945 | Stabilizing | 1.0 | D | 0.797 | deleterious | D | 0.539375848 | None | None | N |
N/K | 0.9993 | likely_pathogenic | 0.9991 | pathogenic | 0.321 | Stabilizing | 1.0 | D | 0.76 | deleterious | D | 0.529550026 | None | None | N |
N/L | 0.9941 | likely_pathogenic | 0.9929 | pathogenic | 0.945 | Stabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
N/M | 0.9954 | likely_pathogenic | 0.9953 | pathogenic | 1.085 | Stabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
N/P | 0.9993 | likely_pathogenic | 0.9994 | pathogenic | 0.756 | Stabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
N/Q | 0.9995 | likely_pathogenic | 0.9995 | pathogenic | -0.753 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
N/R | 0.9991 | likely_pathogenic | 0.9987 | pathogenic | 0.311 | Stabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
N/S | 0.9675 | likely_pathogenic | 0.9704 | pathogenic | -0.425 | Destabilizing | 0.999 | D | 0.6 | neutral | N | 0.505694871 | None | None | N |
N/T | 0.9698 | likely_pathogenic | 0.9694 | pathogenic | -0.156 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | N | 0.507070316 | None | None | N |
N/V | 0.9948 | likely_pathogenic | 0.9946 | pathogenic | 0.756 | Stabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
N/W | 0.9999 | likely_pathogenic | 0.9999 | pathogenic | -0.186 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
N/Y | 0.9969 | likely_pathogenic | 0.996 | pathogenic | 0.43 | Stabilizing | 1.0 | D | 0.807 | deleterious | D | 0.55706203 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.