Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1723 | 5392;5393;5394 | chr2:178776697;178776696;178776695 | chr2:179641424;179641423;179641422 |
N2AB | 1723 | 5392;5393;5394 | chr2:178776697;178776696;178776695 | chr2:179641424;179641423;179641422 |
N2A | 1723 | 5392;5393;5394 | chr2:178776697;178776696;178776695 | chr2:179641424;179641423;179641422 |
N2B | 1677 | 5254;5255;5256 | chr2:178776697;178776696;178776695 | chr2:179641424;179641423;179641422 |
Novex-1 | 1677 | 5254;5255;5256 | chr2:178776697;178776696;178776695 | chr2:179641424;179641423;179641422 |
Novex-2 | 1677 | 5254;5255;5256 | chr2:178776697;178776696;178776695 | chr2:179641424;179641423;179641422 |
Novex-3 | 1723 | 5392;5393;5394 | chr2:178776697;178776696;178776695 | chr2:179641424;179641423;179641422 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs2092262638 | None | 1.0 | D | 0.623 | 0.473 | 0.470484629704 | gnomAD-4.0.0 | 1.59067E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85654E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.6568 | likely_pathogenic | 0.5978 | pathogenic | -0.88 | Destabilizing | 0.999 | D | 0.589 | neutral | D | 0.652798413 | None | None | I |
E/C | 0.9909 | likely_pathogenic | 0.9864 | pathogenic | -0.66 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
E/D | 0.3076 | likely_benign | 0.2773 | benign | -1.497 | Destabilizing | 0.999 | D | 0.481 | neutral | N | 0.51113246 | None | None | I |
E/F | 0.9865 | likely_pathogenic | 0.9797 | pathogenic | -0.157 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | I |
E/G | 0.8147 | likely_pathogenic | 0.7917 | pathogenic | -1.322 | Destabilizing | 1.0 | D | 0.671 | neutral | D | 0.682067013 | None | None | I |
E/H | 0.9293 | likely_pathogenic | 0.886 | pathogenic | -0.612 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
E/I | 0.9042 | likely_pathogenic | 0.8811 | pathogenic | 0.358 | Stabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
E/K | 0.8629 | likely_pathogenic | 0.8304 | pathogenic | -1.336 | Destabilizing | 0.999 | D | 0.539 | neutral | D | 0.584151158 | None | None | I |
E/L | 0.9427 | likely_pathogenic | 0.9179 | pathogenic | 0.358 | Stabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
E/M | 0.9519 | likely_pathogenic | 0.9342 | pathogenic | 0.964 | Stabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
E/N | 0.7902 | likely_pathogenic | 0.7353 | pathogenic | -1.763 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | I |
E/P | 0.9917 | likely_pathogenic | 0.9899 | pathogenic | -0.034 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
E/Q | 0.5581 | ambiguous | 0.4792 | ambiguous | -1.504 | Destabilizing | 1.0 | D | 0.623 | neutral | D | 0.581068828 | None | None | I |
E/R | 0.8859 | likely_pathogenic | 0.8423 | pathogenic | -1.067 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | I |
E/S | 0.6235 | likely_pathogenic | 0.5428 | ambiguous | -2.216 | Highly Destabilizing | 0.999 | D | 0.603 | neutral | None | None | None | None | I |
E/T | 0.7475 | likely_pathogenic | 0.6929 | pathogenic | -1.843 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
E/V | 0.7705 | likely_pathogenic | 0.7261 | pathogenic | -0.034 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | D | 0.576615341 | None | None | I |
E/W | 0.9964 | likely_pathogenic | 0.9938 | pathogenic | -0.044 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | I |
E/Y | 0.9745 | likely_pathogenic | 0.9605 | pathogenic | 0.028 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.