Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17230 | 51913;51914;51915 | chr2:178609735;178609734;178609733 | chr2:179474462;179474461;179474460 |
N2AB | 15589 | 46990;46991;46992 | chr2:178609735;178609734;178609733 | chr2:179474462;179474461;179474460 |
N2A | 14662 | 44209;44210;44211 | chr2:178609735;178609734;178609733 | chr2:179474462;179474461;179474460 |
N2B | 8165 | 24718;24719;24720 | chr2:178609735;178609734;178609733 | chr2:179474462;179474461;179474460 |
Novex-1 | 8290 | 25093;25094;25095 | chr2:178609735;178609734;178609733 | chr2:179474462;179474461;179474460 |
Novex-2 | 8357 | 25294;25295;25296 | chr2:178609735;178609734;178609733 | chr2:179474462;179474461;179474460 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | 0.002 | N | 0.207 | 0.067 | 0.241664281697 | gnomAD-4.0.0 | 1.59666E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87031E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2834 | likely_benign | 0.3168 | benign | -1.511 | Destabilizing | 0.525 | D | 0.539 | neutral | None | None | None | None | I |
I/C | 0.6134 | likely_pathogenic | 0.6455 | pathogenic | -1.102 | Destabilizing | 0.998 | D | 0.593 | neutral | None | None | None | None | I |
I/D | 0.7119 | likely_pathogenic | 0.7335 | pathogenic | -0.503 | Destabilizing | 0.991 | D | 0.688 | prob.neutral | None | None | None | None | I |
I/E | 0.5398 | ambiguous | 0.5857 | pathogenic | -0.52 | Destabilizing | 0.974 | D | 0.685 | prob.neutral | None | None | None | None | I |
I/F | 0.1788 | likely_benign | 0.1791 | benign | -1.126 | Destabilizing | 0.934 | D | 0.609 | neutral | N | 0.463065449 | None | None | I |
I/G | 0.6318 | likely_pathogenic | 0.6545 | pathogenic | -1.798 | Destabilizing | 0.974 | D | 0.677 | prob.neutral | None | None | None | None | I |
I/H | 0.5811 | likely_pathogenic | 0.6221 | pathogenic | -0.84 | Destabilizing | 0.998 | D | 0.677 | prob.neutral | None | None | None | None | I |
I/K | 0.4593 | ambiguous | 0.4963 | ambiguous | -0.795 | Destabilizing | 0.974 | D | 0.683 | prob.neutral | None | None | None | None | I |
I/L | 0.1122 | likely_benign | 0.1176 | benign | -0.818 | Destabilizing | 0.267 | N | 0.275 | neutral | N | 0.367749701 | None | None | I |
I/M | 0.1177 | likely_benign | 0.1245 | benign | -0.711 | Destabilizing | 0.267 | N | 0.307 | neutral | N | 0.444826405 | None | None | I |
I/N | 0.3084 | likely_benign | 0.3411 | ambiguous | -0.606 | Destabilizing | 0.989 | D | 0.693 | prob.neutral | N | 0.457408913 | None | None | I |
I/P | 0.5235 | ambiguous | 0.5957 | pathogenic | -1.016 | Destabilizing | 0.991 | D | 0.69 | prob.neutral | None | None | None | None | I |
I/Q | 0.4674 | ambiguous | 0.5123 | ambiguous | -0.819 | Destabilizing | 0.974 | D | 0.692 | prob.neutral | None | None | None | None | I |
I/R | 0.411 | ambiguous | 0.4365 | ambiguous | -0.198 | Destabilizing | 0.974 | D | 0.685 | prob.neutral | None | None | None | None | I |
I/S | 0.2951 | likely_benign | 0.314 | benign | -1.316 | Destabilizing | 0.891 | D | 0.674 | neutral | N | 0.44018859 | None | None | I |
I/T | 0.2008 | likely_benign | 0.236 | benign | -1.211 | Destabilizing | 0.801 | D | 0.546 | neutral | N | 0.430665029 | None | None | I |
I/V | 0.0637 | likely_benign | 0.0694 | benign | -1.016 | Destabilizing | 0.002 | N | 0.207 | neutral | N | 0.36792306 | None | None | I |
I/W | 0.8199 | likely_pathogenic | 0.812 | pathogenic | -1.073 | Destabilizing | 0.998 | D | 0.688 | prob.neutral | None | None | None | None | I |
I/Y | 0.5508 | ambiguous | 0.5574 | ambiguous | -0.858 | Destabilizing | 0.974 | D | 0.625 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.