Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17233 | 51922;51923;51924 | chr2:178609726;178609725;178609724 | chr2:179474453;179474452;179474451 |
N2AB | 15592 | 46999;47000;47001 | chr2:178609726;178609725;178609724 | chr2:179474453;179474452;179474451 |
N2A | 14665 | 44218;44219;44220 | chr2:178609726;178609725;178609724 | chr2:179474453;179474452;179474451 |
N2B | 8168 | 24727;24728;24729 | chr2:178609726;178609725;178609724 | chr2:179474453;179474452;179474451 |
Novex-1 | 8293 | 25102;25103;25104 | chr2:178609726;178609725;178609724 | chr2:179474453;179474452;179474451 |
Novex-2 | 8360 | 25303;25304;25305 | chr2:178609726;178609725;178609724 | chr2:179474453;179474452;179474451 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs776803516 | -0.858 | 0.987 | N | 0.78 | 0.485 | 0.648041160416 | gnomAD-2.1.1 | 2.43E-05 | None | None | None | None | N | None | 0 | 1.74327E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/L | rs776803516 | -0.858 | 0.987 | N | 0.78 | 0.485 | 0.648041160416 | gnomAD-4.0.0 | 3.431E-06 | None | None | None | None | N | None | 0 | 8.96218E-05 | None | 0 | 0 | None | 0 | 0 | 9.01933E-07 | 0 | 0 |
P/S | rs761840475 | -1.332 | 0.987 | N | 0.713 | 0.446 | 0.361558571881 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.6E-05 | None | 0 | None | 0 | 0 | 0 |
P/S | rs761840475 | -1.332 | 0.987 | N | 0.713 | 0.446 | 0.361558571881 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.9478E-04 | None | 0 | 0 | 0 | 0 | 0 |
P/S | rs761840475 | -1.332 | 0.987 | N | 0.713 | 0.446 | 0.361558571881 | gnomAD-4.0.0 | 1.86372E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 4.47227E-05 | None | 0 | 0 | 0 | 1.10234E-05 | 0 |
P/T | rs761840475 | -1.325 | 0.568 | N | 0.452 | 0.437 | 0.343788945184 | gnomAD-2.1.1 | 8.11E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.6E-05 | None | 0 | None | 0 | 8.97E-06 | 0 |
P/T | rs761840475 | -1.325 | 0.568 | N | 0.452 | 0.437 | 0.343788945184 | gnomAD-4.0.0 | 8.91762E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.17213E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.309 | likely_benign | 0.2524 | benign | -1.507 | Destabilizing | 0.955 | D | 0.596 | neutral | N | 0.479038106 | None | None | N |
P/C | 0.9449 | likely_pathogenic | 0.9372 | pathogenic | -0.94 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
P/D | 0.984 | likely_pathogenic | 0.979 | pathogenic | -1.518 | Destabilizing | 0.995 | D | 0.785 | deleterious | None | None | None | None | N |
P/E | 0.9583 | likely_pathogenic | 0.9462 | pathogenic | -1.57 | Destabilizing | 0.995 | D | 0.769 | deleterious | None | None | None | None | N |
P/F | 0.9557 | likely_pathogenic | 0.9423 | pathogenic | -1.342 | Destabilizing | 0.999 | D | 0.877 | deleterious | None | None | None | None | N |
P/G | 0.9075 | likely_pathogenic | 0.8844 | pathogenic | -1.754 | Destabilizing | 0.995 | D | 0.731 | prob.delet. | None | None | None | None | N |
P/H | 0.9097 | likely_pathogenic | 0.8927 | pathogenic | -1.207 | Destabilizing | 1.0 | D | 0.843 | deleterious | N | 0.518591205 | None | None | N |
P/I | 0.9171 | likely_pathogenic | 0.8867 | pathogenic | -0.942 | Destabilizing | 0.995 | D | 0.855 | deleterious | None | None | None | None | N |
P/K | 0.9789 | likely_pathogenic | 0.9727 | pathogenic | -1.164 | Destabilizing | 0.995 | D | 0.785 | deleterious | None | None | None | None | N |
P/L | 0.8203 | likely_pathogenic | 0.7726 | pathogenic | -0.942 | Destabilizing | 0.987 | D | 0.78 | deleterious | N | 0.506839598 | None | None | N |
P/M | 0.9282 | likely_pathogenic | 0.9065 | pathogenic | -0.652 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
P/N | 0.9703 | likely_pathogenic | 0.9636 | pathogenic | -0.907 | Destabilizing | 0.995 | D | 0.811 | deleterious | None | None | None | None | N |
P/Q | 0.9206 | likely_pathogenic | 0.8985 | pathogenic | -1.199 | Destabilizing | 0.998 | D | 0.825 | deleterious | None | None | None | None | N |
P/R | 0.9531 | likely_pathogenic | 0.9406 | pathogenic | -0.527 | Destabilizing | 0.997 | D | 0.842 | deleterious | N | 0.504245932 | None | None | N |
P/S | 0.7666 | likely_pathogenic | 0.7115 | pathogenic | -1.345 | Destabilizing | 0.987 | D | 0.713 | prob.delet. | N | 0.498966013 | None | None | N |
P/T | 0.773 | likely_pathogenic | 0.7308 | pathogenic | -1.308 | Destabilizing | 0.568 | D | 0.452 | neutral | N | 0.502688996 | None | None | N |
P/V | 0.8131 | likely_pathogenic | 0.7704 | pathogenic | -1.097 | Destabilizing | 0.99 | D | 0.727 | prob.delet. | None | None | None | None | N |
P/W | 0.9816 | likely_pathogenic | 0.9758 | pathogenic | -1.434 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
P/Y | 0.954 | likely_pathogenic | 0.9391 | pathogenic | -1.184 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.