Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17234 | 51925;51926;51927 | chr2:178609723;178609722;178609721 | chr2:179474450;179474449;179474448 |
N2AB | 15593 | 47002;47003;47004 | chr2:178609723;178609722;178609721 | chr2:179474450;179474449;179474448 |
N2A | 14666 | 44221;44222;44223 | chr2:178609723;178609722;178609721 | chr2:179474450;179474449;179474448 |
N2B | 8169 | 24730;24731;24732 | chr2:178609723;178609722;178609721 | chr2:179474450;179474449;179474448 |
Novex-1 | 8294 | 25105;25106;25107 | chr2:178609723;178609722;178609721 | chr2:179474450;179474449;179474448 |
Novex-2 | 8361 | 25306;25307;25308 | chr2:178609723;178609722;178609721 | chr2:179474450;179474449;179474448 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | None | None | 0.863 | N | 0.819 | 0.436 | 0.256793551483 | gnomAD-4.0.0 | 3.20818E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.88401E-05 | 0 |
S/Y | rs768996750 | -0.566 | 0.997 | D | 0.905 | 0.631 | 0.812414231654 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.59E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.4297 | ambiguous | 0.3661 | ambiguous | -0.605 | Destabilizing | 0.863 | D | 0.819 | deleterious | N | 0.497892598 | None | None | N |
S/C | 0.2815 | likely_benign | 0.2935 | benign | -0.543 | Destabilizing | 0.999 | D | 0.83 | deleterious | D | 0.555207557 | None | None | N |
S/D | 0.9944 | likely_pathogenic | 0.9915 | pathogenic | -0.995 | Destabilizing | 0.953 | D | 0.859 | deleterious | None | None | None | None | N |
S/E | 0.9948 | likely_pathogenic | 0.9926 | pathogenic | -0.921 | Destabilizing | 0.91 | D | 0.842 | deleterious | None | None | None | None | N |
S/F | 0.9897 | likely_pathogenic | 0.9839 | pathogenic | -0.383 | Destabilizing | 0.997 | D | 0.904 | deleterious | D | 0.555207557 | None | None | N |
S/G | 0.5206 | ambiguous | 0.4774 | ambiguous | -0.933 | Destabilizing | 0.953 | D | 0.838 | deleterious | None | None | None | None | N |
S/H | 0.9836 | likely_pathogenic | 0.9779 | pathogenic | -1.43 | Destabilizing | 0.999 | D | 0.835 | deleterious | None | None | None | None | N |
S/I | 0.96 | likely_pathogenic | 0.9405 | pathogenic | 0.183 | Stabilizing | 0.993 | D | 0.895 | deleterious | None | None | None | None | N |
S/K | 0.9984 | likely_pathogenic | 0.9977 | pathogenic | -0.975 | Destabilizing | 0.06 | N | 0.628 | neutral | None | None | None | None | N |
S/L | 0.919 | likely_pathogenic | 0.8907 | pathogenic | 0.183 | Stabilizing | 0.953 | D | 0.885 | deleterious | None | None | None | None | N |
S/M | 0.9546 | likely_pathogenic | 0.9399 | pathogenic | 0.256 | Stabilizing | 0.999 | D | 0.835 | deleterious | None | None | None | None | N |
S/N | 0.9463 | likely_pathogenic | 0.9328 | pathogenic | -1.136 | Destabilizing | 0.953 | D | 0.862 | deleterious | None | None | None | None | N |
S/P | 0.9915 | likely_pathogenic | 0.9864 | pathogenic | -0.044 | Destabilizing | 0.991 | D | 0.865 | deleterious | D | 0.554954068 | None | None | N |
S/Q | 0.9867 | likely_pathogenic | 0.9829 | pathogenic | -1.105 | Destabilizing | 0.986 | D | 0.861 | deleterious | None | None | None | None | N |
S/R | 0.9942 | likely_pathogenic | 0.9919 | pathogenic | -1.037 | Destabilizing | 0.973 | D | 0.864 | deleterious | None | None | None | None | N |
S/T | 0.6107 | likely_pathogenic | 0.5299 | ambiguous | -0.944 | Destabilizing | 0.939 | D | 0.848 | deleterious | N | 0.506322388 | None | None | N |
S/V | 0.9002 | likely_pathogenic | 0.8602 | pathogenic | -0.044 | Destabilizing | 0.993 | D | 0.881 | deleterious | None | None | None | None | N |
S/W | 0.9918 | likely_pathogenic | 0.9872 | pathogenic | -0.538 | Destabilizing | 0.999 | D | 0.867 | deleterious | None | None | None | None | N |
S/Y | 0.9849 | likely_pathogenic | 0.9766 | pathogenic | -0.23 | Destabilizing | 0.997 | D | 0.905 | deleterious | D | 0.554954068 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.