Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17235 | 51928;51929;51930 | chr2:178609720;178609719;178609718 | chr2:179474447;179474446;179474445 |
N2AB | 15594 | 47005;47006;47007 | chr2:178609720;178609719;178609718 | chr2:179474447;179474446;179474445 |
N2A | 14667 | 44224;44225;44226 | chr2:178609720;178609719;178609718 | chr2:179474447;179474446;179474445 |
N2B | 8170 | 24733;24734;24735 | chr2:178609720;178609719;178609718 | chr2:179474447;179474446;179474445 |
Novex-1 | 8295 | 25108;25109;25110 | chr2:178609720;178609719;178609718 | chr2:179474447;179474446;179474445 |
Novex-2 | 8362 | 25309;25310;25311 | chr2:178609720;178609719;178609718 | chr2:179474447;179474446;179474445 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/P | None | None | 0.969 | N | 0.517 | 0.195 | 0.308904156042 | gnomAD-4.0.0 | 5.49811E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.22408E-06 | 0 | 0 |
R/Q | rs573695008 | 0.17 | 0.76 | N | 0.515 | 0.096 | 0.139678290688 | gnomAD-2.1.1 | 1.52042E-04 | None | None | None | None | I | None | 0 | 6.54264E-04 | None | 0 | 9.28409E-04 | None | 3.35E-05 | None | 0 | 0 | 0 |
R/Q | rs573695008 | 0.17 | 0.76 | N | 0.515 | 0.096 | 0.139678290688 | gnomAD-3.1.2 | 6.59E-05 | None | None | None | None | I | None | 2.42E-05 | 6.57E-05 | 0 | 0 | 9.74279E-04 | None | 0 | 0 | 1.47E-05 | 2.07383E-04 | 4.78927E-04 |
R/Q | rs573695008 | 0.17 | 0.76 | N | 0.515 | 0.096 | 0.139678290688 | 1000 genomes | 1.99681E-04 | None | None | None | None | I | None | 0 | 0 | None | None | 0 | 0 | None | None | None | 1E-03 | None |
R/Q | rs573695008 | 0.17 | 0.76 | N | 0.515 | 0.096 | 0.139678290688 | gnomAD-4.0.0 | 4.54258E-05 | None | None | None | None | I | None | 1.33636E-05 | 5.01538E-04 | None | 0 | 6.04216E-04 | None | 0 | 0 | 5.95577E-06 | 5.54004E-05 | 4.82393E-05 |
R/W | rs373860372 | -0.355 | 0.996 | N | 0.611 | 0.272 | None | gnomAD-2.1.1 | 1.22E-05 | None | None | None | None | I | None | 6.48E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.8E-05 | 0 |
R/W | rs373860372 | -0.355 | 0.996 | N | 0.611 | 0.272 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/W | rs373860372 | -0.355 | 0.996 | N | 0.611 | 0.272 | None | gnomAD-4.0.0 | 9.9522E-06 | None | None | None | None | I | None | 0 | 0 | None | 3.40832E-05 | 4.47467E-05 | None | 0 | 0 | 1.10576E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.6844 | likely_pathogenic | 0.4651 | ambiguous | -0.123 | Destabilizing | 0.428 | N | 0.365 | neutral | None | None | None | None | I |
R/C | 0.5416 | ambiguous | 0.3091 | benign | -0.431 | Destabilizing | 0.984 | D | 0.548 | neutral | None | None | None | None | I |
R/D | 0.8669 | likely_pathogenic | 0.7357 | pathogenic | -0.393 | Destabilizing | 0.272 | N | 0.445 | neutral | None | None | None | None | I |
R/E | 0.6337 | likely_pathogenic | 0.4468 | ambiguous | -0.375 | Destabilizing | 0.428 | N | 0.344 | neutral | None | None | None | None | I |
R/F | 0.7755 | likely_pathogenic | 0.5937 | pathogenic | -0.503 | Destabilizing | 0.842 | D | 0.495 | neutral | None | None | None | None | I |
R/G | 0.6168 | likely_pathogenic | 0.3654 | ambiguous | -0.21 | Destabilizing | 0.418 | N | 0.427 | neutral | N | 0.492444207 | None | None | I |
R/H | 0.2617 | likely_benign | 0.1609 | benign | -0.654 | Destabilizing | 0.005 | N | 0.393 | neutral | None | None | None | None | I |
R/I | 0.5513 | ambiguous | 0.328 | benign | 0.057 | Stabilizing | 0.842 | D | 0.527 | neutral | None | None | None | None | I |
R/K | 0.1801 | likely_benign | 0.127 | benign | -0.392 | Destabilizing | 0.01 | N | 0.205 | neutral | None | None | None | None | I |
R/L | 0.5126 | ambiguous | 0.3139 | benign | 0.057 | Stabilizing | 0.589 | D | 0.446 | neutral | N | 0.477514827 | None | None | I |
R/M | 0.5904 | likely_pathogenic | 0.3637 | ambiguous | -0.257 | Destabilizing | 0.984 | D | 0.423 | neutral | None | None | None | None | I |
R/N | 0.8316 | likely_pathogenic | 0.6658 | pathogenic | -0.325 | Destabilizing | 0.002 | N | 0.253 | neutral | None | None | None | None | I |
R/P | 0.744 | likely_pathogenic | 0.5626 | ambiguous | 0.012 | Stabilizing | 0.969 | D | 0.517 | neutral | N | 0.448479999 | None | None | I |
R/Q | 0.2399 | likely_benign | 0.181 | benign | -0.339 | Destabilizing | 0.76 | D | 0.515 | neutral | N | 0.465430964 | None | None | I |
R/S | 0.8031 | likely_pathogenic | 0.6002 | pathogenic | -0.462 | Destabilizing | 0.272 | N | 0.389 | neutral | None | None | None | None | I |
R/T | 0.6262 | likely_pathogenic | 0.3796 | ambiguous | -0.366 | Destabilizing | 0.428 | N | 0.433 | neutral | None | None | None | None | I |
R/V | 0.6227 | likely_pathogenic | 0.4241 | ambiguous | 0.012 | Stabilizing | 0.842 | D | 0.48 | neutral | None | None | None | None | I |
R/W | 0.4399 | ambiguous | 0.26 | benign | -0.727 | Destabilizing | 0.996 | D | 0.611 | neutral | N | 0.464919869 | None | None | I |
R/Y | 0.6807 | likely_pathogenic | 0.4848 | ambiguous | -0.357 | Destabilizing | 0.568 | D | 0.555 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.