Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC1723551928;51929;51930 chr2:178609720;178609719;178609718chr2:179474447;179474446;179474445
N2AB1559447005;47006;47007 chr2:178609720;178609719;178609718chr2:179474447;179474446;179474445
N2A1466744224;44225;44226 chr2:178609720;178609719;178609718chr2:179474447;179474446;179474445
N2B817024733;24734;24735 chr2:178609720;178609719;178609718chr2:179474447;179474446;179474445
Novex-1829525108;25109;25110 chr2:178609720;178609719;178609718chr2:179474447;179474446;179474445
Novex-2836225309;25310;25311 chr2:178609720;178609719;178609718chr2:179474447;179474446;179474445
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: R
  • RefSeq wild type transcript codon: CGG
  • RefSeq wild type template codon: GCC
  • Domain: Fn3-13
  • Domain position: 89
  • Structural Position: 122
  • Q(SASA): 0.5096
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
R/P None None 0.969 N 0.517 0.195 0.308904156042 gnomAD-4.0.0 5.49811E-06 None None None None I None 0 0 None 0 0 None 0 0 7.22408E-06 0 0
R/Q rs573695008 0.17 0.76 N 0.515 0.096 0.139678290688 gnomAD-2.1.1 1.52042E-04 None None None None I None 0 6.54264E-04 None 0 9.28409E-04 None 3.35E-05 None 0 0 0
R/Q rs573695008 0.17 0.76 N 0.515 0.096 0.139678290688 gnomAD-3.1.2 6.59E-05 None None None None I None 2.42E-05 6.57E-05 0 0 9.74279E-04 None 0 0 1.47E-05 2.07383E-04 4.78927E-04
R/Q rs573695008 0.17 0.76 N 0.515 0.096 0.139678290688 1000 genomes 1.99681E-04 None None None None I None 0 0 None None 0 0 None None None 1E-03 None
R/Q rs573695008 0.17 0.76 N 0.515 0.096 0.139678290688 gnomAD-4.0.0 4.54258E-05 None None None None I None 1.33636E-05 5.01538E-04 None 0 6.04216E-04 None 0 0 5.95577E-06 5.54004E-05 4.82393E-05
R/W rs373860372 -0.355 0.996 N 0.611 0.272 None gnomAD-2.1.1 1.22E-05 None None None None I None 6.48E-05 0 None 0 0 None 0 None 0 1.8E-05 0
R/W rs373860372 -0.355 0.996 N 0.611 0.272 None gnomAD-3.1.2 6.58E-06 None None None None I None 0 0 0 0 0 None 0 0 1.47E-05 0 0
R/W rs373860372 -0.355 0.996 N 0.611 0.272 None gnomAD-4.0.0 9.9522E-06 None None None None I None 0 0 None 3.40832E-05 4.47467E-05 None 0 0 1.10576E-05 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
R/A 0.6844 likely_pathogenic 0.4651 ambiguous -0.123 Destabilizing 0.428 N 0.365 neutral None None None None I
R/C 0.5416 ambiguous 0.3091 benign -0.431 Destabilizing 0.984 D 0.548 neutral None None None None I
R/D 0.8669 likely_pathogenic 0.7357 pathogenic -0.393 Destabilizing 0.272 N 0.445 neutral None None None None I
R/E 0.6337 likely_pathogenic 0.4468 ambiguous -0.375 Destabilizing 0.428 N 0.344 neutral None None None None I
R/F 0.7755 likely_pathogenic 0.5937 pathogenic -0.503 Destabilizing 0.842 D 0.495 neutral None None None None I
R/G 0.6168 likely_pathogenic 0.3654 ambiguous -0.21 Destabilizing 0.418 N 0.427 neutral N 0.492444207 None None I
R/H 0.2617 likely_benign 0.1609 benign -0.654 Destabilizing 0.005 N 0.393 neutral None None None None I
R/I 0.5513 ambiguous 0.328 benign 0.057 Stabilizing 0.842 D 0.527 neutral None None None None I
R/K 0.1801 likely_benign 0.127 benign -0.392 Destabilizing 0.01 N 0.205 neutral None None None None I
R/L 0.5126 ambiguous 0.3139 benign 0.057 Stabilizing 0.589 D 0.446 neutral N 0.477514827 None None I
R/M 0.5904 likely_pathogenic 0.3637 ambiguous -0.257 Destabilizing 0.984 D 0.423 neutral None None None None I
R/N 0.8316 likely_pathogenic 0.6658 pathogenic -0.325 Destabilizing 0.002 N 0.253 neutral None None None None I
R/P 0.744 likely_pathogenic 0.5626 ambiguous 0.012 Stabilizing 0.969 D 0.517 neutral N 0.448479999 None None I
R/Q 0.2399 likely_benign 0.181 benign -0.339 Destabilizing 0.76 D 0.515 neutral N 0.465430964 None None I
R/S 0.8031 likely_pathogenic 0.6002 pathogenic -0.462 Destabilizing 0.272 N 0.389 neutral None None None None I
R/T 0.6262 likely_pathogenic 0.3796 ambiguous -0.366 Destabilizing 0.428 N 0.433 neutral None None None None I
R/V 0.6227 likely_pathogenic 0.4241 ambiguous 0.012 Stabilizing 0.842 D 0.48 neutral None None None None I
R/W 0.4399 ambiguous 0.26 benign -0.727 Destabilizing 0.996 D 0.611 neutral N 0.464919869 None None I
R/Y 0.6807 likely_pathogenic 0.4848 ambiguous -0.357 Destabilizing 0.568 D 0.555 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.