Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17254 | 51985;51986;51987 | chr2:178609550;178609549;178609548 | chr2:179474277;179474276;179474275 |
N2AB | 15613 | 47062;47063;47064 | chr2:178609550;178609549;178609548 | chr2:179474277;179474276;179474275 |
N2A | 14686 | 44281;44282;44283 | chr2:178609550;178609549;178609548 | chr2:179474277;179474276;179474275 |
N2B | 8189 | 24790;24791;24792 | chr2:178609550;178609549;178609548 | chr2:179474277;179474276;179474275 |
Novex-1 | 8314 | 25165;25166;25167 | chr2:178609550;178609549;178609548 | chr2:179474277;179474276;179474275 |
Novex-2 | 8381 | 25366;25367;25368 | chr2:178609550;178609549;178609548 | chr2:179474277;179474276;179474275 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs370986897 | None | None | N | 0.249 | 0.125 | None | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.3178 | likely_benign | 0.3108 | benign | -0.597 | Destabilizing | None | N | 0.358 | neutral | None | None | None | None | N |
R/C | 0.2237 | likely_benign | 0.2527 | benign | -0.653 | Destabilizing | 0.356 | N | 0.655 | neutral | None | None | None | None | N |
R/D | 0.5132 | ambiguous | 0.462 | ambiguous | 0.021 | Stabilizing | 0.031 | N | 0.56 | neutral | None | None | None | None | N |
R/E | 0.338 | likely_benign | 0.2816 | benign | 0.14 | Stabilizing | 0.016 | N | 0.443 | neutral | None | None | None | None | N |
R/F | 0.5873 | likely_pathogenic | 0.5693 | pathogenic | -0.562 | Destabilizing | 0.356 | N | 0.682 | prob.neutral | None | None | None | None | N |
R/G | 0.1737 | likely_benign | 0.1673 | benign | -0.883 | Destabilizing | 0.005 | N | 0.551 | neutral | N | 0.476165994 | None | None | N |
R/H | 0.1314 | likely_benign | 0.1244 | benign | -1.288 | Destabilizing | 0.356 | N | 0.603 | neutral | None | None | None | None | N |
R/I | 0.392 | ambiguous | 0.3979 | ambiguous | 0.158 | Stabilizing | 0.055 | N | 0.617 | neutral | N | 0.513756133 | None | None | N |
R/K | 0.0996 | likely_benign | 0.1038 | benign | -0.541 | Destabilizing | None | N | 0.249 | neutral | N | 0.432214972 | None | None | N |
R/L | 0.2813 | likely_benign | 0.2797 | benign | 0.158 | Stabilizing | 0.031 | N | 0.56 | neutral | None | None | None | None | N |
R/M | 0.3183 | likely_benign | 0.3403 | ambiguous | -0.252 | Destabilizing | 0.628 | D | 0.624 | neutral | None | None | None | None | N |
R/N | 0.4089 | ambiguous | 0.386 | ambiguous | -0.176 | Destabilizing | 0.031 | N | 0.449 | neutral | None | None | None | None | N |
R/P | 0.2922 | likely_benign | 0.2538 | benign | -0.073 | Destabilizing | 0.136 | N | 0.585 | neutral | None | None | None | None | N |
R/Q | 0.1072 | likely_benign | 0.1033 | benign | -0.296 | Destabilizing | 0.038 | N | 0.481 | neutral | None | None | None | None | N |
R/S | 0.3658 | ambiguous | 0.3502 | ambiguous | -0.862 | Destabilizing | None | N | 0.349 | neutral | N | 0.474645057 | None | None | N |
R/T | 0.2332 | likely_benign | 0.2295 | benign | -0.561 | Destabilizing | 0.012 | N | 0.516 | neutral | N | 0.512369267 | None | None | N |
R/V | 0.4438 | ambiguous | 0.4189 | ambiguous | -0.073 | Destabilizing | 0.016 | N | 0.573 | neutral | None | None | None | None | N |
R/W | 0.2324 | likely_benign | 0.2548 | benign | -0.331 | Destabilizing | 0.864 | D | 0.649 | neutral | None | None | None | None | N |
R/Y | 0.4226 | ambiguous | 0.403 | ambiguous | 0.005 | Stabilizing | 0.356 | N | 0.671 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.