Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17256 | 51991;51992;51993 | chr2:178609544;178609543;178609542 | chr2:179474271;179474270;179474269 |
N2AB | 15615 | 47068;47069;47070 | chr2:178609544;178609543;178609542 | chr2:179474271;179474270;179474269 |
N2A | 14688 | 44287;44288;44289 | chr2:178609544;178609543;178609542 | chr2:179474271;179474270;179474269 |
N2B | 8191 | 24796;24797;24798 | chr2:178609544;178609543;178609542 | chr2:179474271;179474270;179474269 |
Novex-1 | 8316 | 25171;25172;25173 | chr2:178609544;178609543;178609542 | chr2:179474271;179474270;179474269 |
Novex-2 | 8383 | 25372;25373;25374 | chr2:178609544;178609543;178609542 | chr2:179474271;179474270;179474269 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | rs794729454 | None | 0.782 | N | 0.689 | 0.225 | 0.181679512989 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 1.26695E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0869 | likely_benign | 0.0882 | benign | -0.478 | Destabilizing | 0.218 | N | 0.525 | neutral | None | None | None | None | N |
S/C | 0.1357 | likely_benign | 0.1329 | benign | -0.317 | Destabilizing | 0.965 | D | 0.641 | neutral | N | 0.513584696 | None | None | N |
S/D | 0.4535 | ambiguous | 0.3689 | ambiguous | -0.109 | Destabilizing | 0.404 | N | 0.492 | neutral | None | None | None | None | N |
S/E | 0.5403 | ambiguous | 0.4721 | ambiguous | -0.191 | Destabilizing | 0.575 | D | 0.499 | neutral | None | None | None | None | N |
S/F | 0.2176 | likely_benign | 0.1999 | benign | -1.006 | Destabilizing | 0.906 | D | 0.727 | prob.delet. | None | None | None | None | N |
S/G | 0.0831 | likely_benign | 0.0852 | benign | -0.617 | Destabilizing | 0.338 | N | 0.543 | neutral | N | 0.391794423 | None | None | N |
S/H | 0.2936 | likely_benign | 0.2467 | benign | -1.188 | Destabilizing | 0.973 | D | 0.647 | neutral | None | None | None | None | N |
S/I | 0.1925 | likely_benign | 0.1875 | benign | -0.239 | Destabilizing | 0.642 | D | 0.73 | prob.delet. | N | 0.513064621 | None | None | N |
S/K | 0.6427 | likely_pathogenic | 0.5565 | ambiguous | -0.584 | Destabilizing | 0.575 | D | 0.505 | neutral | None | None | None | None | N |
S/L | 0.1451 | likely_benign | 0.1452 | benign | -0.239 | Destabilizing | 0.404 | N | 0.639 | neutral | None | None | None | None | N |
S/M | 0.1979 | likely_benign | 0.2125 | benign | 0.125 | Stabilizing | 0.973 | D | 0.625 | neutral | None | None | None | None | N |
S/N | 0.1259 | likely_benign | 0.1204 | benign | -0.336 | Destabilizing | 0.003 | N | 0.288 | neutral | N | 0.462249012 | None | None | N |
S/P | 0.6183 | likely_pathogenic | 0.5321 | ambiguous | -0.289 | Destabilizing | 0.906 | D | 0.685 | prob.neutral | None | None | None | None | N |
S/Q | 0.4352 | ambiguous | 0.4045 | ambiguous | -0.624 | Destabilizing | 0.906 | D | 0.548 | neutral | None | None | None | None | N |
S/R | 0.5725 | likely_pathogenic | 0.4802 | ambiguous | -0.361 | Destabilizing | 0.782 | D | 0.689 | prob.neutral | N | 0.445916909 | None | None | N |
S/T | 0.0784 | likely_benign | 0.084 | benign | -0.42 | Destabilizing | 0.003 | N | 0.271 | neutral | N | 0.396200165 | None | None | N |
S/V | 0.1789 | likely_benign | 0.1805 | benign | -0.289 | Destabilizing | 0.704 | D | 0.671 | neutral | None | None | None | None | N |
S/W | 0.4516 | ambiguous | 0.4009 | ambiguous | -0.981 | Destabilizing | 0.991 | D | 0.711 | prob.delet. | None | None | None | None | N |
S/Y | 0.2186 | likely_benign | 0.1936 | benign | -0.715 | Destabilizing | 0.906 | D | 0.721 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.