Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC17265401;5402;5403 chr2:178776688;178776687;178776686chr2:179641415;179641414;179641413
N2AB17265401;5402;5403 chr2:178776688;178776687;178776686chr2:179641415;179641414;179641413
N2A17265401;5402;5403 chr2:178776688;178776687;178776686chr2:179641415;179641414;179641413
N2B16805263;5264;5265 chr2:178776688;178776687;178776686chr2:179641415;179641414;179641413
Novex-116805263;5264;5265 chr2:178776688;178776687;178776686chr2:179641415;179641414;179641413
Novex-216805263;5264;5265 chr2:178776688;178776687;178776686chr2:179641415;179641414;179641413
Novex-317265401;5402;5403 chr2:178776688;178776687;178776686chr2:179641415;179641414;179641413

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTA
  • RefSeq wild type template codon: GAT
  • Domain: Ig-8
  • Domain position: 24
  • Structural Position: 35
  • Q(SASA): 0.1016
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/V rs2092262370 None 0.999 N 0.55 0.362 0.294206760003 gnomAD-3.1.2 6.57E-06 None None None None N None 2.41E-05 0 0 0 0 None 0 0 0 0 0
L/V rs2092262370 None 0.999 N 0.55 0.362 0.294206760003 gnomAD-4.0.0 2.02974E-06 None None None None N None 1.7466E-05 0 None 0 0 None 0 0 0 0 3.40252E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.9644 likely_pathogenic 0.956 pathogenic -2.693 Highly Destabilizing 0.999 D 0.71 prob.delet. None None None None N
L/C 0.9689 likely_pathogenic 0.9593 pathogenic -1.792 Destabilizing 1.0 D 0.847 deleterious None None None None N
L/D 0.9997 likely_pathogenic 0.9996 pathogenic -2.913 Highly Destabilizing 1.0 D 0.877 deleterious None None None None N
L/E 0.997 likely_pathogenic 0.9959 pathogenic -2.723 Highly Destabilizing 1.0 D 0.865 deleterious None None None None N
L/F 0.9387 likely_pathogenic 0.9277 pathogenic -1.602 Destabilizing 1.0 D 0.781 deleterious None None None None N
L/G 0.9962 likely_pathogenic 0.9953 pathogenic -3.205 Highly Destabilizing 1.0 D 0.856 deleterious None None None None N
L/H 0.9952 likely_pathogenic 0.9935 pathogenic -2.562 Highly Destabilizing 1.0 D 0.849 deleterious None None None None N
L/I 0.2838 likely_benign 0.2649 benign -1.217 Destabilizing 0.999 D 0.543 neutral N 0.48704223 None None N
L/K 0.9949 likely_pathogenic 0.9929 pathogenic -2.071 Highly Destabilizing 1.0 D 0.869 deleterious None None None None N
L/M 0.5232 ambiguous 0.4729 ambiguous -1.031 Destabilizing 1.0 D 0.753 deleterious None None None None N
L/N 0.9967 likely_pathogenic 0.9954 pathogenic -2.291 Highly Destabilizing 1.0 D 0.877 deleterious None None None None N
L/P 0.9981 likely_pathogenic 0.9978 pathogenic -1.69 Destabilizing 1.0 D 0.873 deleterious D 0.536866685 None None N
L/Q 0.9882 likely_pathogenic 0.9838 pathogenic -2.22 Highly Destabilizing 1.0 D 0.885 deleterious D 0.681599155 None None N
L/R 0.9917 likely_pathogenic 0.9892 pathogenic -1.651 Destabilizing 1.0 D 0.879 deleterious D 0.64346093 None None N
L/S 0.9957 likely_pathogenic 0.9945 pathogenic -2.976 Highly Destabilizing 1.0 D 0.862 deleterious None None None None N
L/T 0.9716 likely_pathogenic 0.9638 pathogenic -2.656 Highly Destabilizing 1.0 D 0.815 deleterious None None None None N
L/V 0.3106 likely_benign 0.2868 benign -1.69 Destabilizing 0.999 D 0.55 neutral N 0.431140597 None None N
L/W 0.9946 likely_pathogenic 0.993 pathogenic -1.984 Destabilizing 1.0 D 0.833 deleterious None None None None N
L/Y 0.993 likely_pathogenic 0.9909 pathogenic -1.752 Destabilizing 1.0 D 0.859 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.