Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17263 | 52012;52013;52014 | chr2:178609523;178609522;178609521 | chr2:179474250;179474249;179474248 |
N2AB | 15622 | 47089;47090;47091 | chr2:178609523;178609522;178609521 | chr2:179474250;179474249;179474248 |
N2A | 14695 | 44308;44309;44310 | chr2:178609523;178609522;178609521 | chr2:179474250;179474249;179474248 |
N2B | 8198 | 24817;24818;24819 | chr2:178609523;178609522;178609521 | chr2:179474250;179474249;179474248 |
Novex-1 | 8323 | 25192;25193;25194 | chr2:178609523;178609522;178609521 | chr2:179474250;179474249;179474248 |
Novex-2 | 8390 | 25393;25394;25395 | chr2:178609523;178609522;178609521 | chr2:179474250;179474249;179474248 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs768268605 | None | None | N | 0.141 | 0.033 | 0.0716867268079 | gnomAD-4.0.0 | 6.84725E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99975E-07 | 0 | 0 |
D/H | None | None | 0.427 | N | 0.421 | 0.083 | 0.170165803431 | gnomAD-4.0.0 | 9.60257E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.05E-05 | 0 | 0 |
D/N | None | None | 0.001 | N | 0.325 | 0.078 | 0.136095386433 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.157 | likely_benign | 0.1562 | benign | -0.424 | Destabilizing | 0.042 | N | 0.372 | neutral | N | 0.461001005 | None | None | N |
D/C | 0.4921 | ambiguous | 0.5038 | ambiguous | 0.073 | Stabilizing | 0.002 | N | 0.357 | neutral | None | None | None | None | N |
D/E | 0.1213 | likely_benign | 0.1218 | benign | -0.424 | Destabilizing | None | N | 0.141 | neutral | N | 0.361930089 | None | None | N |
D/F | 0.5217 | ambiguous | 0.5388 | ambiguous | -0.46 | Destabilizing | 0.331 | N | 0.479 | neutral | None | None | None | None | N |
D/G | 0.2165 | likely_benign | 0.2032 | benign | -0.628 | Destabilizing | None | N | 0.19 | neutral | N | 0.456997908 | None | None | N |
D/H | 0.2589 | likely_benign | 0.2678 | benign | -0.484 | Destabilizing | 0.427 | N | 0.421 | neutral | N | 0.491150554 | None | None | N |
D/I | 0.3786 | ambiguous | 0.3858 | ambiguous | 0.067 | Stabilizing | 0.667 | D | 0.505 | neutral | None | None | None | None | N |
D/K | 0.3174 | likely_benign | 0.3013 | benign | 0.237 | Stabilizing | 0.124 | N | 0.399 | neutral | None | None | None | None | N |
D/L | 0.3898 | ambiguous | 0.392 | ambiguous | 0.067 | Stabilizing | 0.22 | N | 0.442 | neutral | None | None | None | None | N |
D/M | 0.4728 | ambiguous | 0.4874 | ambiguous | 0.359 | Stabilizing | 0.859 | D | 0.449 | neutral | None | None | None | None | N |
D/N | 0.1079 | likely_benign | 0.1096 | benign | -0.045 | Destabilizing | 0.001 | N | 0.325 | neutral | N | 0.430216738 | None | None | N |
D/P | 0.9542 | likely_pathogenic | 0.9389 | pathogenic | -0.075 | Destabilizing | 0.667 | D | 0.463 | neutral | None | None | None | None | N |
D/Q | 0.2319 | likely_benign | 0.2281 | benign | -0.027 | Destabilizing | 0.124 | N | 0.375 | neutral | None | None | None | None | N |
D/R | 0.3804 | ambiguous | 0.363 | ambiguous | 0.301 | Stabilizing | 0.22 | N | 0.485 | neutral | None | None | None | None | N |
D/S | 0.115 | likely_benign | 0.1143 | benign | -0.154 | Destabilizing | 0.002 | N | 0.157 | neutral | None | None | None | None | N |
D/T | 0.1972 | likely_benign | 0.1952 | benign | 0.004 | Stabilizing | 0.124 | N | 0.409 | neutral | None | None | None | None | N |
D/V | 0.2203 | likely_benign | 0.2199 | benign | -0.075 | Destabilizing | 0.175 | N | 0.435 | neutral | N | 0.457088147 | None | None | N |
D/W | 0.8357 | likely_pathogenic | 0.8381 | pathogenic | -0.338 | Destabilizing | 0.958 | D | 0.453 | neutral | None | None | None | None | N |
D/Y | 0.2086 | likely_benign | 0.2196 | benign | -0.23 | Destabilizing | 0.007 | N | 0.313 | neutral | N | 0.454325749 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.