Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17264 | 52015;52016;52017 | chr2:178609520;178609519;178609518 | chr2:179474247;179474246;179474245 |
N2AB | 15623 | 47092;47093;47094 | chr2:178609520;178609519;178609518 | chr2:179474247;179474246;179474245 |
N2A | 14696 | 44311;44312;44313 | chr2:178609520;178609519;178609518 | chr2:179474247;179474246;179474245 |
N2B | 8199 | 24820;24821;24822 | chr2:178609520;178609519;178609518 | chr2:179474247;179474246;179474245 |
Novex-1 | 8324 | 25195;25196;25197 | chr2:178609520;178609519;178609518 | chr2:179474247;179474246;179474245 |
Novex-2 | 8391 | 25396;25397;25398 | chr2:178609520;178609519;178609518 | chr2:179474247;179474246;179474245 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs566710566 | -0.082 | 0.565 | N | 0.489 | 0.149 | 0.180583059064 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs566710566 | -0.082 | 0.565 | N | 0.489 | 0.149 | 0.180583059064 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.57E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs566710566 | -0.082 | 0.565 | N | 0.489 | 0.149 | 0.180583059064 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 1.4E-03 | None | None | 0 | 0 | None | None | None | 0 | None |
E/K | rs566710566 | -0.082 | 0.565 | N | 0.489 | 0.149 | 0.180583059064 | gnomAD-4.0.0 | 6.57652E-06 | None | None | None | None | N | None | 0 | 6.55996E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3127 | likely_benign | 0.2734 | benign | -0.847 | Destabilizing | 0.008 | N | 0.282 | neutral | N | 0.481528206 | None | None | N |
E/C | 0.9133 | likely_pathogenic | 0.8968 | pathogenic | -0.366 | Destabilizing | 0.989 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/D | 0.24 | likely_benign | 0.2346 | benign | -0.85 | Destabilizing | 0.008 | N | 0.187 | neutral | N | 0.462998373 | None | None | N |
E/F | 0.8871 | likely_pathogenic | 0.8558 | pathogenic | -0.442 | Destabilizing | 0.961 | D | 0.69 | prob.neutral | None | None | None | None | N |
E/G | 0.4906 | ambiguous | 0.4193 | ambiguous | -1.162 | Destabilizing | 0.565 | D | 0.548 | neutral | N | 0.467288682 | None | None | N |
E/H | 0.7596 | likely_pathogenic | 0.7112 | pathogenic | -0.604 | Destabilizing | 0.923 | D | 0.509 | neutral | None | None | None | None | N |
E/I | 0.5151 | ambiguous | 0.4879 | ambiguous | -0.003 | Destabilizing | 0.923 | D | 0.688 | prob.neutral | None | None | None | None | N |
E/K | 0.4167 | ambiguous | 0.3486 | ambiguous | -0.287 | Destabilizing | 0.565 | D | 0.489 | neutral | N | 0.449666504 | None | None | N |
E/L | 0.6433 | likely_pathogenic | 0.5958 | pathogenic | -0.003 | Destabilizing | 0.858 | D | 0.579 | neutral | None | None | None | None | N |
E/M | 0.6235 | likely_pathogenic | 0.6007 | pathogenic | 0.357 | Stabilizing | 0.996 | D | 0.655 | neutral | None | None | None | None | N |
E/N | 0.5003 | ambiguous | 0.4653 | ambiguous | -0.74 | Destabilizing | 0.024 | N | 0.263 | neutral | None | None | None | None | N |
E/P | 0.7523 | likely_pathogenic | 0.6849 | pathogenic | -0.264 | Destabilizing | 0.961 | D | 0.577 | neutral | None | None | None | None | N |
E/Q | 0.3208 | likely_benign | 0.2844 | benign | -0.651 | Destabilizing | 0.901 | D | 0.503 | neutral | N | 0.489051611 | None | None | N |
E/R | 0.5969 | likely_pathogenic | 0.5206 | ambiguous | -0.058 | Destabilizing | 0.923 | D | 0.493 | neutral | None | None | None | None | N |
E/S | 0.4047 | ambiguous | 0.3641 | ambiguous | -1.0 | Destabilizing | 0.633 | D | 0.474 | neutral | None | None | None | None | N |
E/T | 0.3583 | ambiguous | 0.3248 | benign | -0.738 | Destabilizing | 0.775 | D | 0.514 | neutral | None | None | None | None | N |
E/V | 0.331 | likely_benign | 0.3064 | benign | -0.264 | Destabilizing | 0.82 | D | 0.557 | neutral | N | 0.481874923 | None | None | N |
E/W | 0.9681 | likely_pathogenic | 0.9555 | pathogenic | -0.182 | Destabilizing | 0.996 | D | 0.736 | prob.delet. | None | None | None | None | N |
E/Y | 0.8276 | likely_pathogenic | 0.7835 | pathogenic | -0.179 | Destabilizing | 0.987 | D | 0.662 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.