Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17266 | 52021;52022;52023 | chr2:178609514;178609513;178609512 | chr2:179474241;179474240;179474239 |
N2AB | 15625 | 47098;47099;47100 | chr2:178609514;178609513;178609512 | chr2:179474241;179474240;179474239 |
N2A | 14698 | 44317;44318;44319 | chr2:178609514;178609513;178609512 | chr2:179474241;179474240;179474239 |
N2B | 8201 | 24826;24827;24828 | chr2:178609514;178609513;178609512 | chr2:179474241;179474240;179474239 |
Novex-1 | 8326 | 25201;25202;25203 | chr2:178609514;178609513;178609512 | chr2:179474241;179474240;179474239 |
Novex-2 | 8393 | 25402;25403;25404 | chr2:178609514;178609513;178609512 | chr2:179474241;179474240;179474239 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | None | N | 0.319 | 0.091 | 0.0884992946249 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.2446 | likely_benign | 0.248 | benign | -1.105 | Destabilizing | 0.001 | N | 0.36 | neutral | None | None | None | None | N |
A/D | 0.2385 | likely_benign | 0.2392 | benign | -1.835 | Destabilizing | 0.001 | N | 0.439 | neutral | None | None | None | None | N |
A/E | 0.2023 | likely_benign | 0.1973 | benign | -1.787 | Destabilizing | None | N | 0.301 | neutral | N | 0.417476727 | None | None | N |
A/F | 0.1589 | likely_benign | 0.1606 | benign | -0.951 | Destabilizing | 0.076 | N | 0.591 | neutral | None | None | None | None | N |
A/G | 0.145 | likely_benign | 0.1485 | benign | -1.376 | Destabilizing | 0.025 | N | 0.47 | neutral | N | 0.49688166 | None | None | N |
A/H | 0.2691 | likely_benign | 0.2575 | benign | -1.639 | Destabilizing | 0.54 | D | 0.535 | neutral | None | None | None | None | N |
A/I | 0.1001 | likely_benign | 0.109 | benign | -0.229 | Destabilizing | None | N | 0.274 | neutral | None | None | None | None | N |
A/K | 0.2857 | likely_benign | 0.2646 | benign | -1.603 | Destabilizing | 0.033 | N | 0.517 | neutral | None | None | None | None | N |
A/L | 0.0911 | likely_benign | 0.0898 | benign | -0.229 | Destabilizing | None | N | 0.275 | neutral | None | None | None | None | N |
A/M | 0.133 | likely_benign | 0.1432 | benign | -0.239 | Destabilizing | 0.015 | N | 0.37 | neutral | None | None | None | None | N |
A/N | 0.178 | likely_benign | 0.1846 | benign | -1.507 | Destabilizing | 0.076 | N | 0.596 | neutral | None | None | None | None | N |
A/P | 0.4531 | ambiguous | 0.4276 | ambiguous | -0.455 | Destabilizing | None | N | 0.321 | neutral | N | 0.4782959 | None | None | N |
A/Q | 0.2188 | likely_benign | 0.2121 | benign | -1.552 | Destabilizing | 0.076 | N | 0.544 | neutral | None | None | None | None | N |
A/R | 0.2557 | likely_benign | 0.231 | benign | -1.287 | Destabilizing | None | N | 0.29 | neutral | None | None | None | None | N |
A/S | 0.0838 | likely_benign | 0.0869 | benign | -1.84 | Destabilizing | None | N | 0.331 | neutral | N | 0.410281396 | None | None | N |
A/T | 0.072 | likely_benign | 0.0747 | benign | -1.686 | Destabilizing | None | N | 0.319 | neutral | N | 0.407334305 | None | None | N |
A/V | 0.0752 | likely_benign | 0.0777 | benign | -0.455 | Destabilizing | None | N | 0.305 | neutral | N | 0.413742989 | None | None | N |
A/W | 0.4858 | ambiguous | 0.474 | ambiguous | -1.467 | Destabilizing | 0.931 | D | 0.607 | neutral | None | None | None | None | N |
A/Y | 0.2618 | likely_benign | 0.2691 | benign | -1.006 | Destabilizing | 0.54 | D | 0.588 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.