Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17267 | 52024;52025;52026 | chr2:178609511;178609510;178609509 | chr2:179474238;179474237;179474236 |
N2AB | 15626 | 47101;47102;47103 | chr2:178609511;178609510;178609509 | chr2:179474238;179474237;179474236 |
N2A | 14699 | 44320;44321;44322 | chr2:178609511;178609510;178609509 | chr2:179474238;179474237;179474236 |
N2B | 8202 | 24829;24830;24831 | chr2:178609511;178609510;178609509 | chr2:179474238;179474237;179474236 |
Novex-1 | 8327 | 25204;25205;25206 | chr2:178609511;178609510;178609509 | chr2:179474238;179474237;179474236 |
Novex-2 | 8394 | 25405;25406;25407 | chr2:178609511;178609510;178609509 | chr2:179474238;179474237;179474236 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs758364988 | -1.678 | 1.0 | D | 0.803 | 0.342 | 0.606442066225 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 8.71E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
L/F | rs758364988 | -1.678 | 1.0 | D | 0.803 | 0.342 | 0.606442066225 | gnomAD-4.0.0 | 4.78184E-06 | None | None | None | None | N | None | 0 | 6.86405E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.909 | likely_pathogenic | 0.9024 | pathogenic | -2.747 | Highly Destabilizing | 0.999 | D | 0.758 | deleterious | None | None | None | None | N |
L/C | 0.8968 | likely_pathogenic | 0.8985 | pathogenic | -2.037 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
L/D | 0.9991 | likely_pathogenic | 0.9989 | pathogenic | -3.631 | Highly Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
L/E | 0.993 | likely_pathogenic | 0.9916 | pathogenic | -3.32 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
L/F | 0.5349 | ambiguous | 0.5009 | ambiguous | -1.697 | Destabilizing | 1.0 | D | 0.803 | deleterious | D | 0.533347546 | None | None | N |
L/G | 0.9905 | likely_pathogenic | 0.9895 | pathogenic | -3.342 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
L/H | 0.9877 | likely_pathogenic | 0.9864 | pathogenic | -2.982 | Highly Destabilizing | 1.0 | D | 0.888 | deleterious | D | 0.597575309 | None | None | N |
L/I | 0.1067 | likely_benign | 0.1022 | benign | -0.964 | Destabilizing | 0.999 | D | 0.559 | neutral | D | 0.550230871 | None | None | N |
L/K | 0.9884 | likely_pathogenic | 0.9867 | pathogenic | -2.34 | Highly Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
L/M | 0.265 | likely_benign | 0.259 | benign | -1.026 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
L/N | 0.9953 | likely_pathogenic | 0.9948 | pathogenic | -3.015 | Highly Destabilizing | 1.0 | D | 0.91 | deleterious | None | None | None | None | N |
L/P | 0.9918 | likely_pathogenic | 0.9904 | pathogenic | -1.548 | Destabilizing | 1.0 | D | 0.911 | deleterious | D | 0.597575309 | None | None | N |
L/Q | 0.9814 | likely_pathogenic | 0.9793 | pathogenic | -2.713 | Highly Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | N |
L/R | 0.9814 | likely_pathogenic | 0.9789 | pathogenic | -2.287 | Highly Destabilizing | 1.0 | D | 0.898 | deleterious | D | 0.597575309 | None | None | N |
L/S | 0.99 | likely_pathogenic | 0.9893 | pathogenic | -3.58 | Highly Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
L/T | 0.938 | likely_pathogenic | 0.9355 | pathogenic | -3.107 | Highly Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
L/V | 0.1527 | likely_benign | 0.1433 | benign | -1.548 | Destabilizing | 0.999 | D | 0.581 | neutral | D | 0.545490064 | None | None | N |
L/W | 0.9402 | likely_pathogenic | 0.9327 | pathogenic | -2.145 | Highly Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
L/Y | 0.9644 | likely_pathogenic | 0.9602 | pathogenic | -1.876 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.