Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17268 | 52027;52028;52029 | chr2:178609508;178609507;178609506 | chr2:179474235;179474234;179474233 |
N2AB | 15627 | 47104;47105;47106 | chr2:178609508;178609507;178609506 | chr2:179474235;179474234;179474233 |
N2A | 14700 | 44323;44324;44325 | chr2:178609508;178609507;178609506 | chr2:179474235;179474234;179474233 |
N2B | 8203 | 24832;24833;24834 | chr2:178609508;178609507;178609506 | chr2:179474235;179474234;179474233 |
Novex-1 | 8328 | 25207;25208;25209 | chr2:178609508;178609507;178609506 | chr2:179474235;179474234;179474233 |
Novex-2 | 8395 | 25408;25409;25410 | chr2:178609508;178609507;178609506 | chr2:179474235;179474234;179474233 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | None | None | 0.565 | N | 0.617 | 0.357 | 0.421060224861 | gnomAD-4.0.0 | 4.10815E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39949E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2094 | likely_benign | 0.2094 | benign | -0.398 | Destabilizing | 0.565 | D | 0.617 | neutral | N | 0.509633162 | None | None | N |
D/C | 0.6257 | likely_pathogenic | 0.6196 | pathogenic | -0.112 | Destabilizing | 0.996 | D | 0.768 | deleterious | None | None | None | None | N |
D/E | 0.1707 | likely_benign | 0.1648 | benign | -0.719 | Destabilizing | 0.003 | N | 0.221 | neutral | N | 0.485686885 | None | None | N |
D/F | 0.4972 | ambiguous | 0.4906 | ambiguous | -0.095 | Destabilizing | 0.987 | D | 0.774 | deleterious | None | None | None | None | N |
D/G | 0.2687 | likely_benign | 0.2736 | benign | -0.746 | Destabilizing | 0.722 | D | 0.523 | neutral | N | 0.500051283 | None | None | N |
D/H | 0.23 | likely_benign | 0.226 | benign | -0.452 | Destabilizing | 0.949 | D | 0.664 | neutral | N | 0.484909542 | None | None | N |
D/I | 0.3102 | likely_benign | 0.3122 | benign | 0.515 | Stabilizing | 0.961 | D | 0.776 | deleterious | None | None | None | None | N |
D/K | 0.3516 | ambiguous | 0.3381 | benign | -0.158 | Destabilizing | 0.633 | D | 0.551 | neutral | None | None | None | None | N |
D/L | 0.3321 | likely_benign | 0.3264 | benign | 0.515 | Stabilizing | 0.923 | D | 0.718 | prob.delet. | None | None | None | None | N |
D/M | 0.5725 | likely_pathogenic | 0.5738 | pathogenic | 0.91 | Stabilizing | 0.996 | D | 0.766 | deleterious | None | None | None | None | N |
D/N | 0.1305 | likely_benign | 0.1312 | benign | -0.628 | Destabilizing | 0.722 | D | 0.517 | neutral | N | 0.513932279 | None | None | N |
D/P | 0.7189 | likely_pathogenic | 0.7081 | pathogenic | 0.237 | Stabilizing | 0.961 | D | 0.621 | neutral | None | None | None | None | N |
D/Q | 0.3164 | likely_benign | 0.303 | benign | -0.486 | Destabilizing | 0.096 | N | 0.359 | neutral | None | None | None | None | N |
D/R | 0.3919 | ambiguous | 0.3754 | ambiguous | -0.071 | Destabilizing | 0.858 | D | 0.662 | neutral | None | None | None | None | N |
D/S | 0.1608 | likely_benign | 0.1604 | benign | -0.846 | Destabilizing | 0.633 | D | 0.519 | neutral | None | None | None | None | N |
D/T | 0.2272 | likely_benign | 0.2311 | benign | -0.555 | Destabilizing | 0.775 | D | 0.561 | neutral | None | None | None | None | N |
D/V | 0.195 | likely_benign | 0.1933 | benign | 0.237 | Stabilizing | 0.901 | D | 0.719 | prob.delet. | N | 0.506681019 | None | None | N |
D/W | 0.8173 | likely_pathogenic | 0.8095 | pathogenic | 0.051 | Stabilizing | 0.996 | D | 0.721 | prob.delet. | None | None | None | None | N |
D/Y | 0.2053 | likely_benign | 0.2068 | benign | 0.154 | Stabilizing | 0.983 | D | 0.781 | deleterious | N | 0.500304772 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.