Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17280 | 52063;52064;52065 | chr2:178609472;178609471;178609470 | chr2:179474199;179474198;179474197 |
N2AB | 15639 | 47140;47141;47142 | chr2:178609472;178609471;178609470 | chr2:179474199;179474198;179474197 |
N2A | 14712 | 44359;44360;44361 | chr2:178609472;178609471;178609470 | chr2:179474199;179474198;179474197 |
N2B | 8215 | 24868;24869;24870 | chr2:178609472;178609471;178609470 | chr2:179474199;179474198;179474197 |
Novex-1 | 8340 | 25243;25244;25245 | chr2:178609472;178609471;178609470 | chr2:179474199;179474198;179474197 |
Novex-2 | 8407 | 25444;25445;25446 | chr2:178609472;178609471;178609470 | chr2:179474199;179474198;179474197 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/K | rs1225457381 | -0.116 | 0.997 | D | 0.777 | 0.423 | 0.490489133298 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.49E-05 | 0 |
T/K | rs1225457381 | -0.116 | 0.997 | D | 0.777 | 0.423 | 0.490489133298 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/K | rs1225457381 | -0.116 | 0.997 | D | 0.777 | 0.423 | 0.490489133298 | gnomAD-4.0.0 | 6.58432E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47223E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1513 | likely_benign | 0.1382 | benign | -0.792 | Destabilizing | 0.76 | D | 0.682 | prob.neutral | N | 0.491404002 | None | None | N |
T/C | 0.4442 | ambiguous | 0.4574 | ambiguous | -0.509 | Destabilizing | 0.252 | N | 0.625 | neutral | None | None | None | None | N |
T/D | 0.6595 | likely_pathogenic | 0.6165 | pathogenic | -0.425 | Destabilizing | 0.998 | D | 0.794 | deleterious | None | None | None | None | N |
T/E | 0.407 | ambiguous | 0.3832 | ambiguous | -0.305 | Destabilizing | 0.998 | D | 0.785 | deleterious | None | None | None | None | N |
T/F | 0.3019 | likely_benign | 0.2926 | benign | -0.523 | Destabilizing | 0.993 | D | 0.837 | deleterious | None | None | None | None | N |
T/G | 0.4872 | ambiguous | 0.4687 | ambiguous | -1.156 | Destabilizing | 0.993 | D | 0.791 | deleterious | None | None | None | None | N |
T/H | 0.24 | likely_benign | 0.2378 | benign | -1.252 | Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | N |
T/I | 0.1979 | likely_benign | 0.1751 | benign | 0.127 | Stabilizing | 0.885 | D | 0.761 | deleterious | N | 0.488165226 | None | None | N |
T/K | 0.2418 | likely_benign | 0.2325 | benign | -0.53 | Destabilizing | 0.997 | D | 0.777 | deleterious | D | 0.531307318 | None | None | N |
T/L | 0.1543 | likely_benign | 0.1429 | benign | 0.127 | Stabilizing | 0.91 | D | 0.736 | prob.delet. | None | None | None | None | N |
T/M | 0.1374 | likely_benign | 0.1348 | benign | 0.068 | Stabilizing | 0.998 | D | 0.785 | deleterious | None | None | None | None | N |
T/N | 0.2343 | likely_benign | 0.2158 | benign | -0.872 | Destabilizing | 0.998 | D | 0.73 | prob.delet. | None | None | None | None | N |
T/P | 0.903 | likely_pathogenic | 0.8822 | pathogenic | -0.146 | Destabilizing | 0.997 | D | 0.819 | deleterious | D | 0.527411929 | None | None | N |
T/Q | 0.2494 | likely_benign | 0.2453 | benign | -0.766 | Destabilizing | 0.998 | D | 0.821 | deleterious | None | None | None | None | N |
T/R | 0.1903 | likely_benign | 0.1905 | benign | -0.547 | Destabilizing | 0.997 | D | 0.823 | deleterious | N | 0.496683921 | None | None | N |
T/S | 0.1403 | likely_benign | 0.1396 | benign | -1.156 | Destabilizing | 0.939 | D | 0.656 | neutral | N | 0.519740743 | None | None | N |
T/V | 0.1751 | likely_benign | 0.1577 | benign | -0.146 | Destabilizing | 0.214 | N | 0.471 | neutral | None | None | None | None | N |
T/W | 0.6409 | likely_pathogenic | 0.6447 | pathogenic | -0.597 | Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | N |
T/Y | 0.3147 | likely_benign | 0.3102 | benign | -0.267 | Destabilizing | 0.998 | D | 0.845 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.