Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17287 | 52084;52085;52086 | chr2:178609451;178609450;178609449 | chr2:179474178;179474177;179474176 |
N2AB | 15646 | 47161;47162;47163 | chr2:178609451;178609450;178609449 | chr2:179474178;179474177;179474176 |
N2A | 14719 | 44380;44381;44382 | chr2:178609451;178609450;178609449 | chr2:179474178;179474177;179474176 |
N2B | 8222 | 24889;24890;24891 | chr2:178609451;178609450;178609449 | chr2:179474178;179474177;179474176 |
Novex-1 | 8347 | 25264;25265;25266 | chr2:178609451;178609450;178609449 | chr2:179474178;179474177;179474176 |
Novex-2 | 8414 | 25465;25466;25467 | chr2:178609451;178609450;178609449 | chr2:179474178;179474177;179474176 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs1333508634 | -0.057 | 0.02 | N | 0.747 | 0.09 | 0.266843984389 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.65E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1207 | likely_benign | 0.1244 | benign | -0.736 | Destabilizing | 0.104 | N | 0.743 | deleterious | N | 0.483494728 | None | None | N |
V/C | 0.4579 | ambiguous | 0.514 | ambiguous | -0.727 | Destabilizing | 0.968 | D | 0.829 | deleterious | None | None | None | None | N |
V/D | 0.2051 | likely_benign | 0.1969 | benign | -0.468 | Destabilizing | 0.331 | N | 0.866 | deleterious | N | 0.494922444 | None | None | N |
V/E | 0.1669 | likely_benign | 0.1614 | benign | -0.558 | Destabilizing | 0.011 | N | 0.661 | neutral | None | None | None | None | N |
V/F | 0.1456 | likely_benign | 0.1569 | benign | -0.784 | Destabilizing | 0.497 | N | 0.885 | deleterious | N | 0.490821345 | None | None | N |
V/G | 0.1887 | likely_benign | 0.1928 | benign | -0.909 | Destabilizing | 0.667 | D | 0.865 | deleterious | D | 0.530499242 | None | None | N |
V/H | 0.3055 | likely_benign | 0.3412 | ambiguous | -0.411 | Destabilizing | 0.968 | D | 0.878 | deleterious | None | None | None | None | N |
V/I | 0.0707 | likely_benign | 0.0732 | benign | -0.416 | Destabilizing | 0.001 | N | 0.396 | neutral | N | 0.475088676 | None | None | N |
V/K | 0.1902 | likely_benign | 0.1998 | benign | -0.699 | Destabilizing | 0.567 | D | 0.865 | deleterious | None | None | None | None | N |
V/L | 0.1327 | likely_benign | 0.1431 | benign | -0.416 | Destabilizing | 0.02 | N | 0.747 | deleterious | N | 0.473952525 | None | None | N |
V/M | 0.1223 | likely_benign | 0.1301 | benign | -0.445 | Destabilizing | 0.567 | D | 0.826 | deleterious | None | None | None | None | N |
V/N | 0.1315 | likely_benign | 0.1424 | benign | -0.483 | Destabilizing | 0.726 | D | 0.893 | deleterious | None | None | None | None | N |
V/P | 0.1855 | likely_benign | 0.186 | benign | -0.487 | Destabilizing | 0.89 | D | 0.89 | deleterious | None | None | None | None | N |
V/Q | 0.1965 | likely_benign | 0.2038 | benign | -0.708 | Destabilizing | 0.567 | D | 0.894 | deleterious | None | None | None | None | N |
V/R | 0.1708 | likely_benign | 0.1838 | benign | -0.145 | Destabilizing | 0.567 | D | 0.897 | deleterious | None | None | None | None | N |
V/S | 0.1397 | likely_benign | 0.1499 | benign | -0.867 | Destabilizing | 0.157 | N | 0.834 | deleterious | None | None | None | None | N |
V/T | 0.1033 | likely_benign | 0.1086 | benign | -0.856 | Destabilizing | 0.005 | N | 0.339 | neutral | None | None | None | None | N |
V/W | 0.6223 | likely_pathogenic | 0.6596 | pathogenic | -0.878 | Destabilizing | 0.968 | D | 0.857 | deleterious | None | None | None | None | N |
V/Y | 0.3109 | likely_benign | 0.3407 | ambiguous | -0.596 | Destabilizing | 0.726 | D | 0.877 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.