Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17288 | 52087;52088;52089 | chr2:178609448;178609447;178609446 | chr2:179474175;179474174;179474173 |
N2AB | 15647 | 47164;47165;47166 | chr2:178609448;178609447;178609446 | chr2:179474175;179474174;179474173 |
N2A | 14720 | 44383;44384;44385 | chr2:178609448;178609447;178609446 | chr2:179474175;179474174;179474173 |
N2B | 8223 | 24892;24893;24894 | chr2:178609448;178609447;178609446 | chr2:179474175;179474174;179474173 |
Novex-1 | 8348 | 25267;25268;25269 | chr2:178609448;178609447;178609446 | chr2:179474175;179474174;179474173 |
Novex-2 | 8415 | 25468;25469;25470 | chr2:178609448;178609447;178609446 | chr2:179474175;179474174;179474173 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1366192608 | None | 0.939 | N | 0.808 | 0.476 | 0.717526509295 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
I/T | rs1366192608 | None | 0.939 | N | 0.808 | 0.476 | 0.717526509295 | gnomAD-4.0.0 | 1.02714E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.25993E-05 | 1.16012E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4323 | ambiguous | 0.4435 | ambiguous | -2.114 | Highly Destabilizing | 0.91 | D | 0.719 | prob.delet. | None | None | None | None | N |
I/C | 0.799 | likely_pathogenic | 0.8236 | pathogenic | -1.534 | Destabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | N |
I/D | 0.9233 | likely_pathogenic | 0.9175 | pathogenic | -2.305 | Highly Destabilizing | 0.998 | D | 0.849 | deleterious | None | None | None | None | N |
I/E | 0.8405 | likely_pathogenic | 0.8264 | pathogenic | -2.089 | Highly Destabilizing | 0.993 | D | 0.855 | deleterious | None | None | None | None | N |
I/F | 0.2134 | likely_benign | 0.2225 | benign | -1.243 | Destabilizing | 0.991 | D | 0.74 | deleterious | D | 0.524808207 | None | None | N |
I/G | 0.8631 | likely_pathogenic | 0.87 | pathogenic | -2.594 | Highly Destabilizing | 0.993 | D | 0.857 | deleterious | None | None | None | None | N |
I/H | 0.8206 | likely_pathogenic | 0.8241 | pathogenic | -1.798 | Destabilizing | 0.999 | D | 0.821 | deleterious | None | None | None | None | N |
I/K | 0.8125 | likely_pathogenic | 0.8033 | pathogenic | -1.773 | Destabilizing | 0.993 | D | 0.855 | deleterious | None | None | None | None | N |
I/L | 0.1247 | likely_benign | 0.1348 | benign | -0.741 | Destabilizing | 0.58 | D | 0.452 | neutral | N | 0.473987024 | None | None | N |
I/M | 0.1415 | likely_benign | 0.154 | benign | -0.743 | Destabilizing | 0.991 | D | 0.773 | deleterious | N | 0.493813993 | None | None | N |
I/N | 0.7546 | likely_pathogenic | 0.7454 | pathogenic | -2.215 | Highly Destabilizing | 0.997 | D | 0.87 | deleterious | N | 0.521579487 | None | None | N |
I/P | 0.8282 | likely_pathogenic | 0.8365 | pathogenic | -1.179 | Destabilizing | 0.998 | D | 0.874 | deleterious | None | None | None | None | N |
I/Q | 0.7916 | likely_pathogenic | 0.7921 | pathogenic | -2.058 | Highly Destabilizing | 0.998 | D | 0.873 | deleterious | None | None | None | None | N |
I/R | 0.7126 | likely_pathogenic | 0.7008 | pathogenic | -1.521 | Destabilizing | 0.998 | D | 0.873 | deleterious | None | None | None | None | N |
I/S | 0.6375 | likely_pathogenic | 0.6414 | pathogenic | -2.836 | Highly Destabilizing | 0.991 | D | 0.855 | deleterious | N | 0.521072508 | None | None | N |
I/T | 0.3462 | ambiguous | 0.3623 | ambiguous | -2.468 | Highly Destabilizing | 0.939 | D | 0.808 | deleterious | N | 0.518284123 | None | None | N |
I/V | 0.0882 | likely_benign | 0.0962 | benign | -1.179 | Destabilizing | 0.02 | N | 0.183 | neutral | N | 0.480187851 | None | None | N |
I/W | 0.8367 | likely_pathogenic | 0.8575 | pathogenic | -1.497 | Destabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | N |
I/Y | 0.6755 | likely_pathogenic | 0.6711 | pathogenic | -1.206 | Destabilizing | 0.998 | D | 0.826 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.