Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17289 | 52090;52091;52092 | chr2:178609445;178609444;178609443 | chr2:179474172;179474171;179474170 |
N2AB | 15648 | 47167;47168;47169 | chr2:178609445;178609444;178609443 | chr2:179474172;179474171;179474170 |
N2A | 14721 | 44386;44387;44388 | chr2:178609445;178609444;178609443 | chr2:179474172;179474171;179474170 |
N2B | 8224 | 24895;24896;24897 | chr2:178609445;178609444;178609443 | chr2:179474172;179474171;179474170 |
Novex-1 | 8349 | 25270;25271;25272 | chr2:178609445;178609444;178609443 | chr2:179474172;179474171;179474170 |
Novex-2 | 8416 | 25471;25472;25473 | chr2:178609445;178609444;178609443 | chr2:179474172;179474171;179474170 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.001 | N | 0.39 | 0.091 | 0.18274738541 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1108 | likely_benign | 0.1098 | benign | -0.724 | Destabilizing | 0.001 | N | 0.39 | neutral | N | 0.447515286 | None | None | N |
V/C | 0.4392 | ambiguous | 0.439 | ambiguous | -0.951 | Destabilizing | 0.245 | N | 0.725 | prob.delet. | None | None | None | None | N |
V/D | 0.199 | likely_benign | 0.1998 | benign | -0.738 | Destabilizing | 0.018 | N | 0.72 | prob.delet. | None | None | None | None | N |
V/E | 0.1268 | likely_benign | 0.1281 | benign | -0.788 | Destabilizing | 0.003 | N | 0.681 | prob.neutral | N | 0.447341927 | None | None | N |
V/F | 0.1006 | likely_benign | 0.1081 | benign | -0.678 | Destabilizing | 0.044 | N | 0.712 | prob.delet. | None | None | None | None | N |
V/G | 0.1486 | likely_benign | 0.1519 | benign | -0.907 | Destabilizing | 0.014 | N | 0.718 | prob.delet. | N | 0.448902152 | None | None | N |
V/H | 0.1908 | likely_benign | 0.1938 | benign | -0.234 | Destabilizing | 0.245 | N | 0.773 | deleterious | None | None | None | None | N |
V/I | 0.0709 | likely_benign | 0.072 | benign | -0.356 | Destabilizing | None | N | 0.175 | neutral | N | 0.449075511 | None | None | N |
V/K | 0.0961 | likely_benign | 0.0978 | benign | -0.783 | Destabilizing | None | N | 0.521 | neutral | None | None | None | None | N |
V/L | 0.1056 | likely_benign | 0.108 | benign | -0.356 | Destabilizing | None | N | 0.382 | neutral | N | 0.419272679 | None | None | N |
V/M | 0.112 | likely_benign | 0.1147 | benign | -0.656 | Destabilizing | 0.138 | N | 0.655 | neutral | None | None | None | None | N |
V/N | 0.1287 | likely_benign | 0.1288 | benign | -0.736 | Destabilizing | 0.018 | N | 0.72 | prob.delet. | None | None | None | None | N |
V/P | 0.2548 | likely_benign | 0.2329 | benign | -0.446 | Destabilizing | 0.085 | N | 0.713 | prob.delet. | None | None | None | None | N |
V/Q | 0.1087 | likely_benign | 0.1093 | benign | -0.897 | Destabilizing | 0.001 | N | 0.567 | neutral | None | None | None | None | N |
V/R | 0.0838 | likely_benign | 0.0867 | benign | -0.248 | Destabilizing | None | N | 0.531 | neutral | None | None | None | None | N |
V/S | 0.108 | likely_benign | 0.1072 | benign | -1.088 | Destabilizing | 0.004 | N | 0.681 | prob.neutral | None | None | None | None | N |
V/T | 0.0902 | likely_benign | 0.0866 | benign | -1.03 | Destabilizing | None | N | 0.175 | neutral | None | None | None | None | N |
V/W | 0.4962 | ambiguous | 0.5429 | ambiguous | -0.778 | Destabilizing | None | N | 0.649 | neutral | None | None | None | None | N |
V/Y | 0.2427 | likely_benign | 0.2628 | benign | -0.502 | Destabilizing | 0.044 | N | 0.705 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.