Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17295 | 52108;52109;52110 | chr2:178609427;178609426;178609425 | chr2:179474154;179474153;179474152 |
N2AB | 15654 | 47185;47186;47187 | chr2:178609427;178609426;178609425 | chr2:179474154;179474153;179474152 |
N2A | 14727 | 44404;44405;44406 | chr2:178609427;178609426;178609425 | chr2:179474154;179474153;179474152 |
N2B | 8230 | 24913;24914;24915 | chr2:178609427;178609426;178609425 | chr2:179474154;179474153;179474152 |
Novex-1 | 8355 | 25288;25289;25290 | chr2:178609427;178609426;178609425 | chr2:179474154;179474153;179474152 |
Novex-2 | 8422 | 25489;25490;25491 | chr2:178609427;178609426;178609425 | chr2:179474154;179474153;179474152 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs72632861 | 0.328 | 0.942 | D | 0.686 | 0.219 | 0.32053947749 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
K/N | rs72632861 | 0.328 | 0.942 | D | 0.686 | 0.219 | 0.32053947749 | gnomAD-4.0.0 | 8.21766E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.04275E-03 | 4.49991E-06 | 0 | 1.65898E-05 |
K/R | None | None | 0.032 | D | 0.406 | 0.093 | 0.379020345274 | gnomAD-4.0.0 | 1.36958E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79994E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4156 | ambiguous | 0.3995 | ambiguous | -0.069 | Destabilizing | 0.754 | D | 0.668 | neutral | None | None | None | None | N |
K/C | 0.8007 | likely_pathogenic | 0.7968 | pathogenic | -0.6 | Destabilizing | 0.998 | D | 0.76 | deleterious | None | None | None | None | N |
K/D | 0.5826 | likely_pathogenic | 0.5668 | pathogenic | -0.468 | Destabilizing | 0.956 | D | 0.769 | deleterious | None | None | None | None | N |
K/E | 0.2241 | likely_benign | 0.2139 | benign | -0.489 | Destabilizing | 0.822 | D | 0.627 | neutral | D | 0.531957892 | None | None | N |
K/F | 0.8029 | likely_pathogenic | 0.7958 | pathogenic | -0.469 | Destabilizing | 0.978 | D | 0.779 | deleterious | None | None | None | None | N |
K/G | 0.4277 | ambiguous | 0.4162 | ambiguous | -0.157 | Destabilizing | 0.86 | D | 0.719 | prob.delet. | None | None | None | None | N |
K/H | 0.42 | ambiguous | 0.4227 | ambiguous | -0.203 | Destabilizing | 0.998 | D | 0.748 | deleterious | None | None | None | None | N |
K/I | 0.4177 | ambiguous | 0.4076 | ambiguous | 0.083 | Stabilizing | 0.915 | D | 0.789 | deleterious | None | None | None | None | N |
K/L | 0.4107 | ambiguous | 0.3999 | ambiguous | 0.083 | Stabilizing | 0.754 | D | 0.721 | prob.delet. | None | None | None | None | N |
K/M | 0.3483 | ambiguous | 0.3455 | ambiguous | -0.313 | Destabilizing | 0.992 | D | 0.743 | deleterious | D | 0.534038192 | None | None | N |
K/N | 0.4452 | ambiguous | 0.4315 | ambiguous | -0.15 | Destabilizing | 0.942 | D | 0.686 | prob.neutral | D | 0.532304609 | None | None | N |
K/P | 0.3871 | ambiguous | 0.356 | ambiguous | 0.052 | Stabilizing | 0.978 | D | 0.796 | deleterious | None | None | None | None | N |
K/Q | 0.1761 | likely_benign | 0.1738 | benign | -0.275 | Destabilizing | 0.942 | D | 0.7 | prob.neutral | D | 0.532824684 | None | None | N |
K/R | 0.1012 | likely_benign | 0.0999 | benign | -0.236 | Destabilizing | 0.032 | N | 0.406 | neutral | D | 0.532651325 | None | None | N |
K/S | 0.472 | ambiguous | 0.4598 | ambiguous | -0.456 | Destabilizing | 0.754 | D | 0.615 | neutral | None | None | None | None | N |
K/T | 0.2607 | likely_benign | 0.2498 | benign | -0.383 | Destabilizing | 0.032 | N | 0.439 | neutral | D | 0.5331714 | None | None | N |
K/V | 0.3886 | ambiguous | 0.3715 | ambiguous | 0.052 | Stabilizing | 0.915 | D | 0.72 | prob.delet. | None | None | None | None | N |
K/W | 0.8081 | likely_pathogenic | 0.8109 | pathogenic | -0.605 | Destabilizing | 0.998 | D | 0.729 | prob.delet. | None | None | None | None | N |
K/Y | 0.6485 | likely_pathogenic | 0.6498 | pathogenic | -0.272 | Destabilizing | 0.993 | D | 0.781 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.