Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17298 | 52117;52118;52119 | chr2:178609418;178609417;178609416 | chr2:179474145;179474144;179474143 |
N2AB | 15657 | 47194;47195;47196 | chr2:178609418;178609417;178609416 | chr2:179474145;179474144;179474143 |
N2A | 14730 | 44413;44414;44415 | chr2:178609418;178609417;178609416 | chr2:179474145;179474144;179474143 |
N2B | 8233 | 24922;24923;24924 | chr2:178609418;178609417;178609416 | chr2:179474145;179474144;179474143 |
Novex-1 | 8358 | 25297;25298;25299 | chr2:178609418;178609417;178609416 | chr2:179474145;179474144;179474143 |
Novex-2 | 8425 | 25498;25499;25500 | chr2:178609418;178609417;178609416 | chr2:179474145;179474144;179474143 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | None | N | 0.268 | 0.089 | 0.0611884634855 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3475 | ambiguous | 0.3444 | ambiguous | -0.912 | Destabilizing | 0.356 | N | 0.463 | neutral | None | None | None | None | N |
A/D | 0.1775 | likely_benign | 0.1639 | benign | -0.679 | Destabilizing | 0.038 | N | 0.488 | neutral | None | None | None | None | N |
A/E | 0.1175 | likely_benign | 0.1127 | benign | -0.808 | Destabilizing | None | N | 0.305 | neutral | N | 0.338382091 | None | None | N |
A/F | 0.1888 | likely_benign | 0.1797 | benign | -1.006 | Destabilizing | 0.214 | N | 0.573 | neutral | None | None | None | None | N |
A/G | 0.1139 | likely_benign | 0.1124 | benign | -0.354 | Destabilizing | 0.024 | N | 0.377 | neutral | N | 0.427022583 | None | None | N |
A/H | 0.2563 | likely_benign | 0.2472 | benign | -0.289 | Destabilizing | 0.356 | N | 0.545 | neutral | None | None | None | None | N |
A/I | 0.1209 | likely_benign | 0.118 | benign | -0.533 | Destabilizing | 0.013 | N | 0.452 | neutral | None | None | None | None | N |
A/K | 0.1761 | likely_benign | 0.1598 | benign | -0.679 | Destabilizing | None | N | 0.327 | neutral | None | None | None | None | N |
A/L | 0.0955 | likely_benign | 0.0947 | benign | -0.533 | Destabilizing | 0.016 | N | 0.404 | neutral | None | None | None | None | N |
A/M | 0.1391 | likely_benign | 0.14 | benign | -0.814 | Destabilizing | 0.356 | N | 0.497 | neutral | None | None | None | None | N |
A/N | 0.1516 | likely_benign | 0.1521 | benign | -0.385 | Destabilizing | 0.072 | N | 0.507 | neutral | None | None | None | None | N |
A/P | 0.0861 | likely_benign | 0.0805 | benign | -0.453 | Destabilizing | None | N | 0.333 | neutral | N | 0.427022583 | None | None | N |
A/Q | 0.146 | likely_benign | 0.1418 | benign | -0.61 | Destabilizing | 0.038 | N | 0.444 | neutral | None | None | None | None | N |
A/R | 0.1918 | likely_benign | 0.1747 | benign | -0.288 | Destabilizing | None | N | 0.307 | neutral | None | None | None | None | N |
A/S | 0.0886 | likely_benign | 0.0898 | benign | -0.555 | Destabilizing | 0.012 | N | 0.365 | neutral | N | 0.425982433 | None | None | N |
A/T | 0.0758 | likely_benign | 0.0746 | benign | -0.62 | Destabilizing | None | N | 0.268 | neutral | N | 0.388290837 | None | None | N |
A/V | 0.0824 | likely_benign | 0.0818 | benign | -0.453 | Destabilizing | None | N | 0.307 | neutral | N | 0.42632915 | None | None | N |
A/W | 0.4936 | ambiguous | 0.465 | ambiguous | -1.091 | Destabilizing | 0.864 | D | 0.583 | neutral | None | None | None | None | N |
A/Y | 0.2679 | likely_benign | 0.2503 | benign | -0.814 | Destabilizing | 0.356 | N | 0.572 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.