Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17300 | 52123;52124;52125 | chr2:178609412;178609411;178609410 | chr2:179474139;179474138;179474137 |
N2AB | 15659 | 47200;47201;47202 | chr2:178609412;178609411;178609410 | chr2:179474139;179474138;179474137 |
N2A | 14732 | 44419;44420;44421 | chr2:178609412;178609411;178609410 | chr2:179474139;179474138;179474137 |
N2B | 8235 | 24928;24929;24930 | chr2:178609412;178609411;178609410 | chr2:179474139;179474138;179474137 |
Novex-1 | 8360 | 25303;25304;25305 | chr2:178609412;178609411;178609410 | chr2:179474139;179474138;179474137 |
Novex-2 | 8427 | 25504;25505;25506 | chr2:178609412;178609411;178609410 | chr2:179474139;179474138;179474137 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs760140429 | -1.621 | 0.029 | N | 0.547 | 0.036 | 0.0762999501168 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 5.82E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
L/F | rs760140429 | -1.621 | 0.029 | N | 0.547 | 0.036 | 0.0762999501168 | gnomAD-4.0.0 | 3.18918E-06 | None | None | None | None | N | None | 0 | 2.2899E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.03251E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.0671 | likely_benign | 0.0694 | benign | -0.489 | Destabilizing | 0.016 | N | 0.391 | neutral | None | None | None | None | N |
L/C | 0.2337 | likely_benign | 0.254 | benign | -0.834 | Destabilizing | 0.676 | D | 0.529 | neutral | None | None | None | None | N |
L/D | 0.2398 | likely_benign | 0.2396 | benign | -0.383 | Destabilizing | 0.214 | N | 0.587 | neutral | None | None | None | None | N |
L/E | 0.1256 | likely_benign | 0.1262 | benign | -0.473 | Destabilizing | 0.072 | N | 0.545 | neutral | None | None | None | None | N |
L/F | 0.0883 | likely_benign | 0.0866 | benign | -0.751 | Destabilizing | 0.029 | N | 0.547 | neutral | N | 0.465580971 | None | None | N |
L/G | 0.1569 | likely_benign | 0.1669 | benign | -0.555 | Destabilizing | 0.072 | N | 0.533 | neutral | None | None | None | None | N |
L/H | 0.1023 | likely_benign | 0.11 | benign | -0.01 | Destabilizing | 0.214 | N | 0.561 | neutral | None | None | None | None | N |
L/I | 0.0613 | likely_benign | 0.0623 | benign | -0.426 | Destabilizing | None | N | 0.189 | neutral | None | None | None | None | N |
L/K | 0.0915 | likely_benign | 0.0981 | benign | -0.42 | Destabilizing | 0.038 | N | 0.499 | neutral | None | None | None | None | N |
L/M | 0.087 | likely_benign | 0.0895 | benign | -0.747 | Destabilizing | 0.005 | N | 0.289 | neutral | N | 0.465580971 | None | None | N |
L/N | 0.12 | likely_benign | 0.1226 | benign | -0.28 | Destabilizing | 0.214 | N | 0.586 | neutral | None | None | None | None | N |
L/P | 0.0565 | likely_benign | 0.0616 | benign | -0.424 | Destabilizing | 0.001 | N | 0.433 | neutral | None | None | None | None | N |
L/Q | 0.0746 | likely_benign | 0.079 | benign | -0.442 | Destabilizing | 0.214 | N | 0.559 | neutral | None | None | None | None | N |
L/R | 0.081 | likely_benign | 0.0864 | benign | -0.014 | Destabilizing | 0.001 | N | 0.401 | neutral | None | None | None | None | N |
L/S | 0.0837 | likely_benign | 0.0884 | benign | -0.611 | Destabilizing | 0.029 | N | 0.505 | neutral | N | 0.465060896 | None | None | N |
L/T | 0.074 | likely_benign | 0.0739 | benign | -0.613 | Destabilizing | None | N | 0.343 | neutral | None | None | None | None | N |
L/V | 0.0572 | likely_benign | 0.0599 | benign | -0.424 | Destabilizing | None | N | 0.234 | neutral | N | 0.404241724 | None | None | N |
L/W | 0.1531 | likely_benign | 0.1581 | benign | -0.772 | Destabilizing | 0.612 | D | 0.575 | neutral | N | 0.466274405 | None | None | N |
L/Y | 0.171 | likely_benign | 0.1809 | benign | -0.554 | Destabilizing | 0.001 | N | 0.331 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.