Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17307 | 52144;52145;52146 | chr2:178609391;178609390;178609389 | chr2:179474118;179474117;179474116 |
N2AB | 15666 | 47221;47222;47223 | chr2:178609391;178609390;178609389 | chr2:179474118;179474117;179474116 |
N2A | 14739 | 44440;44441;44442 | chr2:178609391;178609390;178609389 | chr2:179474118;179474117;179474116 |
N2B | 8242 | 24949;24950;24951 | chr2:178609391;178609390;178609389 | chr2:179474118;179474117;179474116 |
Novex-1 | 8367 | 25324;25325;25326 | chr2:178609391;178609390;178609389 | chr2:179474118;179474117;179474116 |
Novex-2 | 8434 | 25525;25526;25527 | chr2:178609391;178609390;178609389 | chr2:179474118;179474117;179474116 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs745810412 | -1.006 | 0.704 | N | 0.411 | 0.148 | 0.354610295913 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
E/A | rs745810412 | -1.006 | 0.704 | N | 0.411 | 0.148 | 0.354610295913 | gnomAD-4.0.0 | 1.59449E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86366E-06 | 0 | 0 |
E/K | None | None | 0.704 | N | 0.441 | 0.189 | 0.306377322295 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.104 | likely_benign | 0.1036 | benign | 0.03 | Stabilizing | 0.704 | D | 0.411 | neutral | N | 0.494959729 | None | None | N |
E/C | 0.6127 | likely_pathogenic | 0.6225 | pathogenic | -0.286 | Destabilizing | 0.999 | D | 0.478 | neutral | None | None | None | None | N |
E/D | 0.0809 | likely_benign | 0.0857 | benign | -0.452 | Destabilizing | 0.959 | D | 0.419 | neutral | N | 0.495133087 | None | None | N |
E/F | 0.4279 | ambiguous | 0.4128 | ambiguous | -0.065 | Destabilizing | 0.997 | D | 0.44 | neutral | None | None | None | None | N |
E/G | 0.1223 | likely_benign | 0.123 | benign | -0.056 | Destabilizing | 0.015 | N | 0.221 | neutral | N | 0.495826521 | None | None | N |
E/H | 0.2665 | likely_benign | 0.2588 | benign | 0.582 | Stabilizing | 0.997 | D | 0.414 | neutral | None | None | None | None | N |
E/I | 0.1688 | likely_benign | 0.1652 | benign | 0.196 | Stabilizing | 0.997 | D | 0.449 | neutral | None | None | None | None | N |
E/K | 0.1214 | likely_benign | 0.117 | benign | 0.339 | Stabilizing | 0.704 | D | 0.441 | neutral | N | 0.456652057 | None | None | N |
E/L | 0.2182 | likely_benign | 0.2195 | benign | 0.196 | Stabilizing | 0.969 | D | 0.425 | neutral | None | None | None | None | N |
E/M | 0.2532 | likely_benign | 0.2577 | benign | -0.08 | Destabilizing | 0.999 | D | 0.413 | neutral | None | None | None | None | N |
E/N | 0.1453 | likely_benign | 0.1499 | benign | 0.124 | Stabilizing | 0.969 | D | 0.418 | neutral | None | None | None | None | N |
E/P | 0.2752 | likely_benign | 0.2652 | benign | 0.157 | Stabilizing | 0.997 | D | 0.393 | neutral | None | None | None | None | N |
E/Q | 0.1206 | likely_benign | 0.1239 | benign | 0.118 | Stabilizing | 0.92 | D | 0.445 | neutral | N | 0.494959729 | None | None | N |
E/R | 0.1943 | likely_benign | 0.1801 | benign | 0.55 | Stabilizing | 0.046 | N | 0.187 | neutral | None | None | None | None | N |
E/S | 0.134 | likely_benign | 0.1361 | benign | 0.003 | Stabilizing | 0.939 | D | 0.398 | neutral | None | None | None | None | N |
E/T | 0.1265 | likely_benign | 0.1245 | benign | 0.083 | Stabilizing | 0.969 | D | 0.396 | neutral | None | None | None | None | N |
E/V | 0.1204 | likely_benign | 0.1185 | benign | 0.157 | Stabilizing | 0.988 | D | 0.417 | neutral | N | 0.45838564 | None | None | N |
E/W | 0.6993 | likely_pathogenic | 0.689 | pathogenic | -0.053 | Destabilizing | 0.999 | D | 0.509 | neutral | None | None | None | None | N |
E/Y | 0.3619 | ambiguous | 0.3525 | ambiguous | 0.145 | Stabilizing | 0.997 | D | 0.412 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.