Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17312 | 52159;52160;52161 | chr2:178609376;178609375;178609374 | chr2:179474103;179474102;179474101 |
N2AB | 15671 | 47236;47237;47238 | chr2:178609376;178609375;178609374 | chr2:179474103;179474102;179474101 |
N2A | 14744 | 44455;44456;44457 | chr2:178609376;178609375;178609374 | chr2:179474103;179474102;179474101 |
N2B | 8247 | 24964;24965;24966 | chr2:178609376;178609375;178609374 | chr2:179474103;179474102;179474101 |
Novex-1 | 8372 | 25339;25340;25341 | chr2:178609376;178609375;178609374 | chr2:179474103;179474102;179474101 |
Novex-2 | 8439 | 25540;25541;25542 | chr2:178609376;178609375;178609374 | chr2:179474103;179474102;179474101 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.027 | N | 0.259 | 0.134 | 0.263140351381 | gnomAD-4.0.0 | 1.20037E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31252E-06 | 0 | 0 |
E/K | rs749451611 | 0.746 | None | N | 0.141 | 0.132 | 0.208816687407 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/K | rs749451611 | 0.746 | None | N | 0.141 | 0.132 | 0.208816687407 | gnomAD-4.0.0 | 3.42426E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.64231E-05 | 1.65953E-05 |
E/Q | rs749451611 | -0.416 | None | N | 0.168 | 0.049 | 0.239901079897 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/Q | rs749451611 | -0.416 | None | N | 0.168 | 0.049 | 0.239901079897 | gnomAD-4.0.0 | 1.3697E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00014E-07 | 1.16058E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1009 | likely_benign | 0.1027 | benign | 0.024 | Stabilizing | 0.027 | N | 0.259 | neutral | N | 0.4811072 | None | None | N |
E/C | 0.6769 | likely_pathogenic | 0.7072 | pathogenic | -0.254 | Destabilizing | 0.935 | D | 0.318 | neutral | None | None | None | None | N |
E/D | 0.1052 | likely_benign | 0.1158 | benign | -0.369 | Destabilizing | 0.052 | N | 0.237 | neutral | N | 0.51756723 | None | None | N |
E/F | 0.4582 | ambiguous | 0.4601 | ambiguous | -0.075 | Destabilizing | 0.555 | D | 0.324 | neutral | None | None | None | None | N |
E/G | 0.1145 | likely_benign | 0.1179 | benign | -0.074 | Destabilizing | None | N | 0.181 | neutral | N | 0.482121158 | None | None | N |
E/H | 0.3112 | likely_benign | 0.3301 | benign | 0.58 | Stabilizing | 0.38 | N | 0.265 | neutral | None | None | None | None | N |
E/I | 0.1599 | likely_benign | 0.162 | benign | 0.22 | Stabilizing | 0.555 | D | 0.354 | neutral | None | None | None | None | N |
E/K | 0.101 | likely_benign | 0.1019 | benign | 0.347 | Stabilizing | None | N | 0.141 | neutral | N | 0.514793496 | None | None | N |
E/L | 0.1841 | likely_benign | 0.1825 | benign | 0.22 | Stabilizing | 0.149 | N | 0.337 | neutral | None | None | None | None | N |
E/M | 0.2453 | likely_benign | 0.245 | benign | -0.065 | Destabilizing | 0.824 | D | 0.314 | neutral | None | None | None | None | N |
E/N | 0.1615 | likely_benign | 0.1679 | benign | 0.163 | Stabilizing | 0.081 | N | 0.185 | neutral | None | None | None | None | N |
E/P | 0.2124 | likely_benign | 0.2252 | benign | 0.172 | Stabilizing | 0.555 | D | 0.279 | neutral | None | None | None | None | N |
E/Q | 0.1084 | likely_benign | 0.12 | benign | 0.157 | Stabilizing | None | N | 0.168 | neutral | N | 0.48872719 | None | None | N |
E/R | 0.1895 | likely_benign | 0.1888 | benign | 0.587 | Stabilizing | 0.081 | N | 0.199 | neutral | None | None | None | None | N |
E/S | 0.1467 | likely_benign | 0.1509 | benign | 0.021 | Stabilizing | 0.002 | N | 0.118 | neutral | None | None | None | None | N |
E/T | 0.1266 | likely_benign | 0.1289 | benign | 0.106 | Stabilizing | 0.081 | N | 0.254 | neutral | None | None | None | None | N |
E/V | 0.1092 | likely_benign | 0.1113 | benign | 0.172 | Stabilizing | 0.117 | N | 0.314 | neutral | N | 0.482374647 | None | None | N |
E/W | 0.74 | likely_pathogenic | 0.7679 | pathogenic | -0.059 | Destabilizing | 0.935 | D | 0.349 | neutral | None | None | None | None | N |
E/Y | 0.3716 | ambiguous | 0.4013 | ambiguous | 0.14 | Stabilizing | 0.555 | D | 0.343 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.