Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17317 | 52174;52175;52176 | chr2:178609361;178609360;178609359 | chr2:179474088;179474087;179474086 |
N2AB | 15676 | 47251;47252;47253 | chr2:178609361;178609360;178609359 | chr2:179474088;179474087;179474086 |
N2A | 14749 | 44470;44471;44472 | chr2:178609361;178609360;178609359 | chr2:179474088;179474087;179474086 |
N2B | 8252 | 24979;24980;24981 | chr2:178609361;178609360;178609359 | chr2:179474088;179474087;179474086 |
Novex-1 | 8377 | 25354;25355;25356 | chr2:178609361;178609360;178609359 | chr2:179474088;179474087;179474086 |
Novex-2 | 8444 | 25555;25556;25557 | chr2:178609361;178609360;178609359 | chr2:179474088;179474087;179474086 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 0.007 | N | 0.159 | 0.035 | 0.119812018005 | gnomAD-4.0.0 | 1.59462E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86393E-06 | 0 | 0 |
P/T | None | None | 0.007 | N | 0.145 | 0.032 | 0.136095386433 | gnomAD-4.0.0 | 1.59462E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.03177E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1271 | likely_benign | 0.1451 | benign | -0.891 | Destabilizing | 0.201 | N | 0.353 | neutral | N | 0.513387987 | None | None | N |
P/C | 0.5155 | ambiguous | 0.5783 | pathogenic | -0.771 | Destabilizing | 0.992 | D | 0.453 | neutral | None | None | None | None | N |
P/D | 0.3866 | ambiguous | 0.4149 | ambiguous | -0.506 | Destabilizing | 0.617 | D | 0.373 | neutral | None | None | None | None | N |
P/E | 0.2985 | likely_benign | 0.3353 | benign | -0.557 | Destabilizing | 0.617 | D | 0.314 | neutral | None | None | None | None | N |
P/F | 0.6468 | likely_pathogenic | 0.7002 | pathogenic | -0.733 | Destabilizing | 0.85 | D | 0.485 | neutral | None | None | None | None | N |
P/G | 0.2751 | likely_benign | 0.313 | benign | -1.125 | Destabilizing | 0.447 | N | 0.396 | neutral | None | None | None | None | N |
P/H | 0.2413 | likely_benign | 0.2663 | benign | -0.514 | Destabilizing | 0.97 | D | 0.429 | neutral | N | 0.482291606 | None | None | N |
P/I | 0.5498 | ambiguous | 0.6072 | pathogenic | -0.39 | Destabilizing | 0.447 | N | 0.453 | neutral | None | None | None | None | N |
P/K | 0.3528 | ambiguous | 0.4062 | ambiguous | -0.804 | Destabilizing | 0.447 | N | 0.313 | neutral | None | None | None | None | N |
P/L | 0.2089 | likely_benign | 0.2381 | benign | -0.39 | Destabilizing | 0.004 | N | 0.319 | neutral | N | 0.489128461 | None | None | N |
P/M | 0.4861 | ambiguous | 0.5339 | ambiguous | -0.415 | Destabilizing | 0.85 | D | 0.441 | neutral | None | None | None | None | N |
P/N | 0.3053 | likely_benign | 0.3451 | ambiguous | -0.601 | Destabilizing | 0.447 | N | 0.42 | neutral | None | None | None | None | N |
P/Q | 0.2061 | likely_benign | 0.2445 | benign | -0.786 | Destabilizing | 0.85 | D | 0.411 | neutral | None | None | None | None | N |
P/R | 0.2724 | likely_benign | 0.3058 | benign | -0.249 | Destabilizing | 0.81 | D | 0.439 | neutral | N | 0.508174168 | None | None | N |
P/S | 0.1246 | likely_benign | 0.1293 | benign | -1.073 | Destabilizing | 0.007 | N | 0.159 | neutral | N | 0.491223204 | None | None | N |
P/T | 0.1339 | likely_benign | 0.1505 | benign | -1.014 | Destabilizing | 0.007 | N | 0.145 | neutral | N | 0.477293901 | None | None | N |
P/V | 0.3581 | ambiguous | 0.4089 | ambiguous | -0.52 | Destabilizing | 0.447 | N | 0.399 | neutral | None | None | None | None | N |
P/W | 0.7377 | likely_pathogenic | 0.7809 | pathogenic | -0.845 | Destabilizing | 0.992 | D | 0.514 | neutral | None | None | None | None | N |
P/Y | 0.5189 | ambiguous | 0.5641 | pathogenic | -0.564 | Destabilizing | 0.972 | D | 0.495 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.