Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17319 | 52180;52181;52182 | chr2:178609355;178609354;178609353 | chr2:179474082;179474081;179474080 |
N2AB | 15678 | 47257;47258;47259 | chr2:178609355;178609354;178609353 | chr2:179474082;179474081;179474080 |
N2A | 14751 | 44476;44477;44478 | chr2:178609355;178609354;178609353 | chr2:179474082;179474081;179474080 |
N2B | 8254 | 24985;24986;24987 | chr2:178609355;178609354;178609353 | chr2:179474082;179474081;179474080 |
Novex-1 | 8379 | 25360;25361;25362 | chr2:178609355;178609354;178609353 | chr2:179474082;179474081;179474080 |
Novex-2 | 8446 | 25561;25562;25563 | chr2:178609355;178609354;178609353 | chr2:179474082;179474081;179474080 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.047 | N | 0.186 | 0.026 | 0.12205267543 | gnomAD-4.0.0 | 3.18938E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72846E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1003 | likely_benign | 0.0894 | benign | -0.857 | Destabilizing | 0.047 | N | 0.186 | neutral | N | 0.482162924 | None | None | N |
T/C | 0.3936 | ambiguous | 0.39 | ambiguous | -0.671 | Destabilizing | 0.94 | D | 0.315 | neutral | None | None | None | None | N |
T/D | 0.2598 | likely_benign | 0.2328 | benign | -0.67 | Destabilizing | 0.129 | N | 0.319 | neutral | None | None | None | None | N |
T/E | 0.255 | likely_benign | 0.2062 | benign | -0.608 | Destabilizing | 0.129 | N | 0.303 | neutral | None | None | None | None | N |
T/F | 0.2611 | likely_benign | 0.2069 | benign | -0.667 | Destabilizing | 0.836 | D | 0.487 | neutral | None | None | None | None | N |
T/G | 0.1834 | likely_benign | 0.1683 | benign | -1.183 | Destabilizing | 0.129 | N | 0.237 | neutral | None | None | None | None | N |
T/H | 0.1842 | likely_benign | 0.1444 | benign | -1.442 | Destabilizing | 0.836 | D | 0.405 | neutral | None | None | None | None | N |
T/I | 0.2397 | likely_benign | 0.1861 | benign | -0.057 | Destabilizing | 0.007 | N | 0.123 | neutral | N | 0.4644283 | None | None | N |
T/K | 0.2042 | likely_benign | 0.1606 | benign | -0.91 | Destabilizing | 0.001 | N | 0.089 | neutral | N | 0.481816207 | None | None | N |
T/L | 0.1155 | likely_benign | 0.0929 | benign | -0.057 | Destabilizing | 0.061 | N | 0.254 | neutral | None | None | None | None | N |
T/M | 0.1379 | likely_benign | 0.1204 | benign | 0.087 | Stabilizing | 0.836 | D | 0.327 | neutral | None | None | None | None | N |
T/N | 0.1001 | likely_benign | 0.0915 | benign | -1.052 | Destabilizing | 0.004 | N | 0.043 | neutral | None | None | None | None | N |
T/P | 0.0775 | likely_benign | 0.0614 | benign | -0.29 | Destabilizing | 0.001 | N | 0.061 | neutral | N | 0.470561851 | None | None | N |
T/Q | 0.182 | likely_benign | 0.1484 | benign | -1.09 | Destabilizing | 0.264 | N | 0.385 | neutral | None | None | None | None | N |
T/R | 0.1712 | likely_benign | 0.1393 | benign | -0.786 | Destabilizing | 0.213 | N | 0.361 | neutral | N | 0.505405143 | None | None | N |
T/S | 0.0918 | likely_benign | 0.0863 | benign | -1.288 | Destabilizing | 0.003 | N | 0.053 | neutral | N | 0.434808907 | None | None | N |
T/V | 0.1905 | likely_benign | 0.1537 | benign | -0.29 | Destabilizing | 0.004 | N | 0.077 | neutral | None | None | None | None | N |
T/W | 0.5209 | ambiguous | 0.4683 | ambiguous | -0.672 | Destabilizing | 0.983 | D | 0.399 | neutral | None | None | None | None | N |
T/Y | 0.2702 | likely_benign | 0.2216 | benign | -0.418 | Destabilizing | 0.94 | D | 0.479 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.