Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17320 | 52183;52184;52185 | chr2:178609352;178609351;178609350 | chr2:179474079;179474078;179474077 |
N2AB | 15679 | 47260;47261;47262 | chr2:178609352;178609351;178609350 | chr2:179474079;179474078;179474077 |
N2A | 14752 | 44479;44480;44481 | chr2:178609352;178609351;178609350 | chr2:179474079;179474078;179474077 |
N2B | 8255 | 24988;24989;24990 | chr2:178609352;178609351;178609350 | chr2:179474079;179474078;179474077 |
Novex-1 | 8380 | 25363;25364;25365 | chr2:178609352;178609351;178609350 | chr2:179474079;179474078;179474077 |
Novex-2 | 8447 | 25564;25565;25566 | chr2:178609352;178609351;178609350 | chr2:179474079;179474078;179474077 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/K | None | None | 0.003 | N | 0.138 | 0.079 | 0.0482279557977 | gnomAD-4.0.0 | 6.84892E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16152E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1766 | likely_benign | 0.1888 | benign | -0.638 | Destabilizing | 0.004 | N | 0.177 | neutral | None | None | None | None | N |
Q/C | 0.6959 | likely_pathogenic | 0.7237 | pathogenic | -0.1 | Destabilizing | 0.788 | D | 0.347 | neutral | None | None | None | None | N |
Q/D | 0.2437 | likely_benign | 0.2481 | benign | -1.038 | Destabilizing | None | N | 0.043 | neutral | None | None | None | None | N |
Q/E | 0.06 | likely_benign | 0.0584 | benign | -0.932 | Destabilizing | None | N | 0.047 | neutral | N | 0.347923429 | None | None | N |
Q/F | 0.7843 | likely_pathogenic | 0.7866 | pathogenic | -0.343 | Destabilizing | 0.497 | N | 0.476 | neutral | None | None | None | None | N |
Q/G | 0.2332 | likely_benign | 0.2421 | benign | -1.008 | Destabilizing | 0.008 | N | 0.225 | neutral | None | None | None | None | N |
Q/H | 0.2707 | likely_benign | 0.2915 | benign | -0.979 | Destabilizing | 0.196 | N | 0.285 | neutral | N | 0.446164839 | None | None | N |
Q/I | 0.5003 | ambiguous | 0.5284 | ambiguous | 0.313 | Stabilizing | 0.085 | N | 0.513 | neutral | None | None | None | None | N |
Q/K | 0.1285 | likely_benign | 0.1473 | benign | -0.504 | Destabilizing | 0.003 | N | 0.138 | neutral | N | 0.391522277 | None | None | N |
Q/L | 0.2055 | likely_benign | 0.2172 | benign | 0.313 | Stabilizing | 0.014 | N | 0.303 | neutral | N | 0.446511555 | None | None | N |
Q/M | 0.3985 | ambiguous | 0.402 | ambiguous | 0.8 | Stabilizing | 0.497 | N | 0.255 | neutral | None | None | None | None | N |
Q/N | 0.2602 | likely_benign | 0.2804 | benign | -1.08 | Destabilizing | 0.018 | N | 0.182 | neutral | None | None | None | None | N |
Q/P | 0.2106 | likely_benign | 0.2993 | benign | 0.028 | Stabilizing | 0.028 | N | 0.318 | neutral | N | 0.403296709 | None | None | N |
Q/R | 0.1667 | likely_benign | 0.1874 | benign | -0.46 | Destabilizing | 0.007 | N | 0.216 | neutral | N | 0.419074238 | None | None | N |
Q/S | 0.1829 | likely_benign | 0.1844 | benign | -1.134 | Destabilizing | 0.004 | N | 0.123 | neutral | None | None | None | None | N |
Q/T | 0.2012 | likely_benign | 0.2163 | benign | -0.839 | Destabilizing | 0.018 | N | 0.284 | neutral | None | None | None | None | N |
Q/V | 0.2868 | likely_benign | 0.309 | benign | 0.028 | Stabilizing | 0.018 | N | 0.299 | neutral | None | None | None | None | N |
Q/W | 0.6536 | likely_pathogenic | 0.7154 | pathogenic | -0.273 | Destabilizing | 0.788 | D | 0.329 | neutral | None | None | None | None | N |
Q/Y | 0.5142 | ambiguous | 0.5282 | ambiguous | -0.021 | Destabilizing | 0.22 | N | 0.431 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.