Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17326 | 52201;52202;52203 | chr2:178609334;178609333;178609332 | chr2:179474061;179474060;179474059 |
N2AB | 15685 | 47278;47279;47280 | chr2:178609334;178609333;178609332 | chr2:179474061;179474060;179474059 |
N2A | 14758 | 44497;44498;44499 | chr2:178609334;178609333;178609332 | chr2:179474061;179474060;179474059 |
N2B | 8261 | 25006;25007;25008 | chr2:178609334;178609333;178609332 | chr2:179474061;179474060;179474059 |
Novex-1 | 8386 | 25381;25382;25383 | chr2:178609334;178609333;178609332 | chr2:179474061;179474060;179474059 |
Novex-2 | 8453 | 25582;25583;25584 | chr2:178609334;178609333;178609332 | chr2:179474061;179474060;179474059 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs1179567067 | None | 0.565 | D | 0.591 | 0.22 | 0.0401082797425 | gnomAD-4.0.0 | 6.86553E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00959E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3387 | likely_benign | 0.3259 | benign | -0.507 | Destabilizing | 0.633 | D | 0.67 | neutral | None | None | None | None | N |
N/C | 0.3227 | likely_benign | 0.3133 | benign | 0.361 | Stabilizing | 0.996 | D | 0.753 | deleterious | None | None | None | None | N |
N/D | 0.1598 | likely_benign | 0.1568 | benign | -0.139 | Destabilizing | 0.565 | D | 0.573 | neutral | N | 0.521322398 | None | None | N |
N/E | 0.4594 | ambiguous | 0.4731 | ambiguous | -0.154 | Destabilizing | 0.011 | N | 0.353 | neutral | None | None | None | None | N |
N/F | 0.5677 | likely_pathogenic | 0.5568 | ambiguous | -0.776 | Destabilizing | 0.961 | D | 0.769 | deleterious | None | None | None | None | N |
N/G | 0.3822 | ambiguous | 0.3683 | ambiguous | -0.718 | Destabilizing | 0.633 | D | 0.567 | neutral | None | None | None | None | N |
N/H | 0.1397 | likely_benign | 0.14 | benign | -0.782 | Destabilizing | 0.949 | D | 0.685 | prob.neutral | N | 0.498823515 | None | None | N |
N/I | 0.3018 | likely_benign | 0.3023 | benign | -0.028 | Destabilizing | 0.949 | D | 0.765 | deleterious | D | 0.528056369 | None | None | N |
N/K | 0.4355 | ambiguous | 0.4313 | ambiguous | 0.043 | Stabilizing | 0.565 | D | 0.591 | neutral | D | 0.526842861 | None | None | N |
N/L | 0.265 | likely_benign | 0.2595 | benign | -0.028 | Destabilizing | 0.923 | D | 0.747 | deleterious | None | None | None | None | N |
N/M | 0.4004 | ambiguous | 0.3861 | ambiguous | 0.521 | Stabilizing | 0.996 | D | 0.751 | deleterious | None | None | None | None | N |
N/P | 0.5127 | ambiguous | 0.5089 | ambiguous | -0.16 | Destabilizing | 0.961 | D | 0.769 | deleterious | None | None | None | None | N |
N/Q | 0.3993 | ambiguous | 0.4052 | ambiguous | -0.498 | Destabilizing | 0.237 | N | 0.316 | neutral | None | None | None | None | N |
N/R | 0.4219 | ambiguous | 0.4179 | ambiguous | 0.097 | Stabilizing | 0.775 | D | 0.649 | neutral | None | None | None | None | N |
N/S | 0.1054 | likely_benign | 0.1057 | benign | -0.251 | Destabilizing | 0.034 | N | 0.376 | neutral | N | 0.477531548 | None | None | N |
N/T | 0.1602 | likely_benign | 0.1516 | benign | -0.11 | Destabilizing | 0.565 | D | 0.59 | neutral | N | 0.480033136 | None | None | N |
N/V | 0.2937 | likely_benign | 0.2912 | benign | -0.16 | Destabilizing | 0.923 | D | 0.753 | deleterious | None | None | None | None | N |
N/W | 0.8227 | likely_pathogenic | 0.8214 | pathogenic | -0.676 | Destabilizing | 0.996 | D | 0.717 | prob.delet. | None | None | None | None | N |
N/Y | 0.2015 | likely_benign | 0.1965 | benign | -0.432 | Destabilizing | 0.983 | D | 0.765 | deleterious | N | 0.490554628 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.