Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17329 | 52210;52211;52212 | chr2:178609325;178609324;178609323 | chr2:179474052;179474051;179474050 |
N2AB | 15688 | 47287;47288;47289 | chr2:178609325;178609324;178609323 | chr2:179474052;179474051;179474050 |
N2A | 14761 | 44506;44507;44508 | chr2:178609325;178609324;178609323 | chr2:179474052;179474051;179474050 |
N2B | 8264 | 25015;25016;25017 | chr2:178609325;178609324;178609323 | chr2:179474052;179474051;179474050 |
Novex-1 | 8389 | 25390;25391;25392 | chr2:178609325;178609324;178609323 | chr2:179474052;179474051;179474050 |
Novex-2 | 8456 | 25591;25592;25593 | chr2:178609325;178609324;178609323 | chr2:179474052;179474051;179474050 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1463878310 | 0.309 | 0.055 | N | 0.377 | 0.058 | 0.0806252709748 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.66E-05 | None | 0 | None | 0 | 0 | 0 |
K/N | rs1463878310 | 0.309 | 0.055 | N | 0.377 | 0.058 | 0.0806252709748 | gnomAD-4.0.0 | 6.85839E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.5346E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2008 | likely_benign | 0.199 | benign | -0.14 | Destabilizing | 0.016 | N | 0.44 | neutral | None | None | None | None | I |
K/C | 0.5554 | ambiguous | 0.528 | ambiguous | -0.589 | Destabilizing | 0.864 | D | 0.345 | neutral | None | None | None | None | I |
K/D | 0.3807 | ambiguous | 0.3912 | ambiguous | -0.219 | Destabilizing | 0.038 | N | 0.426 | neutral | None | None | None | None | I |
K/E | 0.1185 | likely_benign | 0.119 | benign | -0.204 | Destabilizing | None | N | 0.296 | neutral | N | 0.463942523 | None | None | I |
K/F | 0.5528 | ambiguous | 0.5467 | ambiguous | -0.454 | Destabilizing | 0.356 | N | 0.374 | neutral | None | None | None | None | I |
K/G | 0.3442 | ambiguous | 0.3458 | ambiguous | -0.289 | Destabilizing | 0.072 | N | 0.408 | neutral | None | None | None | None | I |
K/H | 0.2285 | likely_benign | 0.2187 | benign | -0.359 | Destabilizing | 0.001 | N | 0.343 | neutral | None | None | None | None | I |
K/I | 0.2157 | likely_benign | 0.2177 | benign | 0.176 | Stabilizing | 0.356 | N | 0.39 | neutral | None | None | None | None | I |
K/L | 0.2213 | likely_benign | 0.213 | benign | 0.176 | Stabilizing | 0.072 | N | 0.459 | neutral | None | None | None | None | I |
K/M | 0.1756 | likely_benign | 0.1759 | benign | -0.273 | Destabilizing | 0.295 | N | 0.381 | neutral | N | 0.462288706 | None | None | I |
K/N | 0.2662 | likely_benign | 0.2848 | benign | -0.165 | Destabilizing | 0.055 | N | 0.377 | neutral | N | 0.500516611 | None | None | I |
K/P | 0.213 | likely_benign | 0.2187 | benign | 0.094 | Stabilizing | 0.136 | N | 0.425 | neutral | None | None | None | None | I |
K/Q | 0.1094 | likely_benign | 0.1056 | benign | -0.238 | Destabilizing | None | N | 0.265 | neutral | N | 0.464193239 | None | None | I |
K/R | 0.076 | likely_benign | 0.0716 | benign | -0.11 | Destabilizing | None | N | 0.244 | neutral | N | 0.455957758 | None | None | I |
K/S | 0.2938 | likely_benign | 0.2976 | benign | -0.536 | Destabilizing | 0.003 | N | 0.303 | neutral | None | None | None | None | I |
K/T | 0.1449 | likely_benign | 0.1481 | benign | -0.387 | Destabilizing | 0.055 | N | 0.445 | neutral | N | 0.492878563 | None | None | I |
K/V | 0.2141 | likely_benign | 0.2088 | benign | 0.094 | Stabilizing | 0.072 | N | 0.437 | neutral | None | None | None | None | I |
K/W | 0.554 | ambiguous | 0.542 | ambiguous | -0.559 | Destabilizing | 0.864 | D | 0.366 | neutral | None | None | None | None | I |
K/Y | 0.4135 | ambiguous | 0.402 | ambiguous | -0.207 | Destabilizing | 0.214 | N | 0.399 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.