Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17332 | 52219;52220;52221 | chr2:178609316;178609315;178609314 | chr2:179474043;179474042;179474041 |
N2AB | 15691 | 47296;47297;47298 | chr2:178609316;178609315;178609314 | chr2:179474043;179474042;179474041 |
N2A | 14764 | 44515;44516;44517 | chr2:178609316;178609315;178609314 | chr2:179474043;179474042;179474041 |
N2B | 8267 | 25024;25025;25026 | chr2:178609316;178609315;178609314 | chr2:179474043;179474042;179474041 |
Novex-1 | 8392 | 25399;25400;25401 | chr2:178609316;178609315;178609314 | chr2:179474043;179474042;179474041 |
Novex-2 | 8459 | 25600;25601;25602 | chr2:178609316;178609315;178609314 | chr2:179474043;179474042;179474041 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | None | None | 0.892 | N | 0.667 | 0.098 | 0.144782658237 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.2467 | likely_benign | 0.2589 | benign | -0.678 | Destabilizing | 0.025 | N | 0.451 | neutral | N | 0.50882945 | None | None | N |
S/C | 0.2096 | likely_benign | 0.2378 | benign | -0.838 | Destabilizing | 0.995 | D | 0.796 | deleterious | N | 0.503020986 | None | None | N |
S/D | 0.974 | likely_pathogenic | 0.9747 | pathogenic | -2.011 | Highly Destabilizing | 0.957 | D | 0.713 | prob.delet. | None | None | None | None | N |
S/E | 0.9851 | likely_pathogenic | 0.986 | pathogenic | -1.792 | Destabilizing | 0.916 | D | 0.706 | prob.neutral | None | None | None | None | N |
S/F | 0.9087 | likely_pathogenic | 0.9151 | pathogenic | -0.639 | Destabilizing | 0.983 | D | 0.822 | deleterious | N | 0.454615704 | None | None | N |
S/G | 0.4797 | ambiguous | 0.5002 | ambiguous | -1.086 | Destabilizing | 0.845 | D | 0.695 | prob.neutral | None | None | None | None | N |
S/H | 0.9337 | likely_pathogenic | 0.9402 | pathogenic | -1.556 | Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | N |
S/I | 0.7453 | likely_pathogenic | 0.7596 | pathogenic | 0.362 | Stabilizing | 0.975 | D | 0.811 | deleterious | None | None | None | None | N |
S/K | 0.9963 | likely_pathogenic | 0.9965 | pathogenic | -0.32 | Destabilizing | 0.916 | D | 0.711 | prob.delet. | None | None | None | None | N |
S/L | 0.6481 | likely_pathogenic | 0.6629 | pathogenic | 0.362 | Stabilizing | 0.845 | D | 0.776 | deleterious | None | None | None | None | N |
S/M | 0.6821 | likely_pathogenic | 0.6808 | pathogenic | 0.283 | Stabilizing | 0.999 | D | 0.798 | deleterious | None | None | None | None | N |
S/N | 0.7916 | likely_pathogenic | 0.8154 | pathogenic | -1.314 | Destabilizing | 0.987 | D | 0.741 | deleterious | None | None | None | None | N |
S/P | 0.993 | likely_pathogenic | 0.9923 | pathogenic | 0.051 | Stabilizing | 0.983 | D | 0.799 | deleterious | N | 0.468253415 | None | None | N |
S/Q | 0.975 | likely_pathogenic | 0.9766 | pathogenic | -0.994 | Destabilizing | 0.987 | D | 0.771 | deleterious | None | None | None | None | N |
S/R | 0.9953 | likely_pathogenic | 0.9956 | pathogenic | -0.762 | Destabilizing | 0.987 | D | 0.805 | deleterious | None | None | None | None | N |
S/T | 0.1343 | likely_benign | 0.1424 | benign | -0.832 | Destabilizing | 0.892 | D | 0.667 | neutral | N | 0.441028378 | None | None | N |
S/V | 0.6236 | likely_pathogenic | 0.6447 | pathogenic | 0.051 | Stabilizing | 0.95 | D | 0.789 | deleterious | None | None | None | None | N |
S/W | 0.945 | likely_pathogenic | 0.9447 | pathogenic | -1.017 | Destabilizing | 0.999 | D | 0.808 | deleterious | None | None | None | None | N |
S/Y | 0.8557 | likely_pathogenic | 0.8701 | pathogenic | -0.507 | Destabilizing | 0.994 | D | 0.824 | deleterious | N | 0.458085197 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.