Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17338 | 52237;52238;52239 | chr2:178609298;178609297;178609296 | chr2:179474025;179474024;179474023 |
N2AB | 15697 | 47314;47315;47316 | chr2:178609298;178609297;178609296 | chr2:179474025;179474024;179474023 |
N2A | 14770 | 44533;44534;44535 | chr2:178609298;178609297;178609296 | chr2:179474025;179474024;179474023 |
N2B | 8273 | 25042;25043;25044 | chr2:178609298;178609297;178609296 | chr2:179474025;179474024;179474023 |
Novex-1 | 8398 | 25417;25418;25419 | chr2:178609298;178609297;178609296 | chr2:179474025;179474024;179474023 |
Novex-2 | 8465 | 25618;25619;25620 | chr2:178609298;178609297;178609296 | chr2:179474025;179474024;179474023 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | None | None | 1.0 | N | 0.753 | 0.359 | 0.20549828249 | gnomAD-4.0.0 | 1.62489E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.9099E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.4377 | ambiguous | 0.4632 | ambiguous | -0.466 | Destabilizing | 0.984 | D | 0.642 | neutral | N | 0.50436778 | None | None | N |
D/C | 0.8279 | likely_pathogenic | 0.8476 | pathogenic | -0.03 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
D/E | 0.2454 | likely_benign | 0.2645 | benign | -0.455 | Destabilizing | 0.999 | D | 0.454 | neutral | N | 0.488416893 | None | None | N |
D/F | 0.7922 | likely_pathogenic | 0.8191 | pathogenic | -0.357 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
D/G | 0.3368 | likely_benign | 0.3347 | benign | -0.695 | Destabilizing | 0.275 | N | 0.357 | neutral | N | 0.480682844 | None | None | N |
D/H | 0.5847 | likely_pathogenic | 0.5769 | pathogenic | -0.354 | Destabilizing | 1.0 | D | 0.753 | deleterious | N | 0.501655549 | None | None | N |
D/I | 0.8099 | likely_pathogenic | 0.8395 | pathogenic | 0.102 | Stabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
D/K | 0.7149 | likely_pathogenic | 0.6963 | pathogenic | 0.193 | Stabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | N |
D/L | 0.7202 | likely_pathogenic | 0.7447 | pathogenic | 0.102 | Stabilizing | 0.999 | D | 0.777 | deleterious | None | None | None | None | N |
D/M | 0.8728 | likely_pathogenic | 0.8965 | pathogenic | 0.367 | Stabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
D/N | 0.1948 | likely_benign | 0.2057 | benign | -0.191 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | N | 0.45782184 | None | None | N |
D/P | 0.9527 | likely_pathogenic | 0.9462 | pathogenic | -0.065 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
D/Q | 0.597 | likely_pathogenic | 0.5962 | pathogenic | -0.146 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
D/R | 0.7493 | likely_pathogenic | 0.7297 | pathogenic | 0.323 | Stabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
D/S | 0.3167 | likely_benign | 0.3294 | benign | -0.305 | Destabilizing | 0.994 | D | 0.621 | neutral | None | None | None | None | N |
D/T | 0.6128 | likely_pathogenic | 0.6497 | pathogenic | -0.119 | Destabilizing | 0.999 | D | 0.79 | deleterious | None | None | None | None | N |
D/V | 0.6319 | likely_pathogenic | 0.6637 | pathogenic | -0.065 | Destabilizing | 1.0 | D | 0.775 | deleterious | N | 0.458480499 | None | None | N |
D/W | 0.9517 | likely_pathogenic | 0.9569 | pathogenic | -0.187 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
D/Y | 0.3957 | ambiguous | 0.4007 | ambiguous | -0.112 | Destabilizing | 1.0 | D | 0.784 | deleterious | N | 0.458227009 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.