Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17340 | 52243;52244;52245 | chr2:178609292;178609291;178609290 | chr2:179474019;179474018;179474017 |
N2AB | 15699 | 47320;47321;47322 | chr2:178609292;178609291;178609290 | chr2:179474019;179474018;179474017 |
N2A | 14772 | 44539;44540;44541 | chr2:178609292;178609291;178609290 | chr2:179474019;179474018;179474017 |
N2B | 8275 | 25048;25049;25050 | chr2:178609292;178609291;178609290 | chr2:179474019;179474018;179474017 |
Novex-1 | 8400 | 25423;25424;25425 | chr2:178609292;178609291;178609290 | chr2:179474019;179474018;179474017 |
Novex-2 | 8467 | 25624;25625;25626 | chr2:178609292;178609291;178609290 | chr2:179474019;179474018;179474017 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs770603604 | -1.215 | 0.317 | N | 0.327 | 0.06 | 0.132336055621 | gnomAD-2.1.1 | 1.01923E-04 | None | None | None | None | N | None | 0 | 6.96505E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.76929E-04 |
L/F | rs770603604 | -1.215 | 0.317 | N | 0.327 | 0.06 | 0.132336055621 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 1.9698E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/F | rs770603604 | -1.215 | 0.317 | N | 0.327 | 0.06 | 0.132336055621 | gnomAD-4.0.0 | 3.26908E-05 | None | None | None | None | N | None | 0 | 4.00641E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 5.81159E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2078 | likely_benign | 0.2121 | benign | -1.656 | Destabilizing | 0.001 | N | 0.154 | neutral | None | None | None | None | N |
L/C | 0.337 | likely_benign | 0.3374 | benign | -1.059 | Destabilizing | 0.555 | D | 0.369 | neutral | None | None | None | None | N |
L/D | 0.609 | likely_pathogenic | 0.6185 | pathogenic | -0.929 | Destabilizing | 0.555 | D | 0.437 | neutral | None | None | None | None | N |
L/E | 0.2501 | likely_benign | 0.2411 | benign | -0.916 | Destabilizing | 0.555 | D | 0.413 | neutral | None | None | None | None | N |
L/F | 0.1311 | likely_benign | 0.1314 | benign | -1.121 | Destabilizing | 0.317 | N | 0.327 | neutral | N | 0.48930598 | None | None | N |
L/G | 0.5064 | ambiguous | 0.5348 | ambiguous | -1.988 | Destabilizing | 0.149 | N | 0.418 | neutral | None | None | None | None | N |
L/H | 0.2143 | likely_benign | 0.201 | benign | -1.117 | Destabilizing | 0.915 | D | 0.408 | neutral | N | 0.452307817 | None | None | N |
L/I | 0.0639 | likely_benign | 0.0652 | benign | -0.819 | Destabilizing | None | N | 0.091 | neutral | N | 0.419446037 | None | None | N |
L/K | 0.1996 | likely_benign | 0.1984 | benign | -1.148 | Destabilizing | 0.555 | D | 0.384 | neutral | None | None | None | None | N |
L/M | 0.1059 | likely_benign | 0.1056 | benign | -0.632 | Destabilizing | 0.38 | N | 0.398 | neutral | None | None | None | None | N |
L/N | 0.2931 | likely_benign | 0.312 | benign | -1.007 | Destabilizing | 0.791 | D | 0.436 | neutral | None | None | None | None | N |
L/P | 0.8754 | likely_pathogenic | 0.8709 | pathogenic | -1.066 | Destabilizing | 0.484 | N | 0.435 | neutral | N | 0.508334458 | None | None | N |
L/Q | 0.1125 | likely_benign | 0.1057 | benign | -1.16 | Destabilizing | 0.791 | D | 0.408 | neutral | None | None | None | None | N |
L/R | 0.1651 | likely_benign | 0.1544 | benign | -0.543 | Destabilizing | 0.484 | N | 0.406 | neutral | N | 0.421638193 | None | None | N |
L/S | 0.2166 | likely_benign | 0.2233 | benign | -1.666 | Destabilizing | 0.081 | N | 0.365 | neutral | None | None | None | None | N |
L/T | 0.156 | likely_benign | 0.1562 | benign | -1.532 | Destabilizing | 0.081 | N | 0.314 | neutral | None | None | None | None | N |
L/V | 0.0669 | likely_benign | 0.0631 | benign | -1.066 | Destabilizing | None | N | 0.109 | neutral | N | 0.411903989 | None | None | N |
L/W | 0.364 | ambiguous | 0.3421 | ambiguous | -1.18 | Destabilizing | 0.935 | D | 0.459 | neutral | None | None | None | None | N |
L/Y | 0.3308 | likely_benign | 0.3276 | benign | -0.966 | Destabilizing | 0.555 | D | 0.373 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.