Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC1734052243;52244;52245 chr2:178609292;178609291;178609290chr2:179474019;179474018;179474017
N2AB1569947320;47321;47322 chr2:178609292;178609291;178609290chr2:179474019;179474018;179474017
N2A1477244539;44540;44541 chr2:178609292;178609291;178609290chr2:179474019;179474018;179474017
N2B827525048;25049;25050 chr2:178609292;178609291;178609290chr2:179474019;179474018;179474017
Novex-1840025423;25424;25425 chr2:178609292;178609291;178609290chr2:179474019;179474018;179474017
Novex-2846725624;25625;25626 chr2:178609292;178609291;178609290chr2:179474019;179474018;179474017
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTC
  • RefSeq wild type template codon: GAG
  • Domain: Ig-112
  • Domain position: 90
  • Structural Position: 145
  • Q(SASA): 0.3777
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F rs770603604 -1.215 0.317 N 0.327 0.06 0.132336055621 gnomAD-2.1.1 1.01923E-04 None None None None N None 0 6.96505E-04 None 0 0 None 0 None 0 0 1.76929E-04
L/F rs770603604 -1.215 0.317 N 0.327 0.06 0.132336055621 gnomAD-3.1.2 1.97E-05 None None None None N None 0 1.9698E-04 0 0 0 None 0 0 0 0 0
L/F rs770603604 -1.215 0.317 N 0.327 0.06 0.132336055621 gnomAD-4.0.0 3.26908E-05 None None None None N None 0 4.00641E-04 None 0 0 None 0 0 0 0 5.81159E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.2078 likely_benign 0.2121 benign -1.656 Destabilizing 0.001 N 0.154 neutral None None None None N
L/C 0.337 likely_benign 0.3374 benign -1.059 Destabilizing 0.555 D 0.369 neutral None None None None N
L/D 0.609 likely_pathogenic 0.6185 pathogenic -0.929 Destabilizing 0.555 D 0.437 neutral None None None None N
L/E 0.2501 likely_benign 0.2411 benign -0.916 Destabilizing 0.555 D 0.413 neutral None None None None N
L/F 0.1311 likely_benign 0.1314 benign -1.121 Destabilizing 0.317 N 0.327 neutral N 0.48930598 None None N
L/G 0.5064 ambiguous 0.5348 ambiguous -1.988 Destabilizing 0.149 N 0.418 neutral None None None None N
L/H 0.2143 likely_benign 0.201 benign -1.117 Destabilizing 0.915 D 0.408 neutral N 0.452307817 None None N
L/I 0.0639 likely_benign 0.0652 benign -0.819 Destabilizing None N 0.091 neutral N 0.419446037 None None N
L/K 0.1996 likely_benign 0.1984 benign -1.148 Destabilizing 0.555 D 0.384 neutral None None None None N
L/M 0.1059 likely_benign 0.1056 benign -0.632 Destabilizing 0.38 N 0.398 neutral None None None None N
L/N 0.2931 likely_benign 0.312 benign -1.007 Destabilizing 0.791 D 0.436 neutral None None None None N
L/P 0.8754 likely_pathogenic 0.8709 pathogenic -1.066 Destabilizing 0.484 N 0.435 neutral N 0.508334458 None None N
L/Q 0.1125 likely_benign 0.1057 benign -1.16 Destabilizing 0.791 D 0.408 neutral None None None None N
L/R 0.1651 likely_benign 0.1544 benign -0.543 Destabilizing 0.484 N 0.406 neutral N 0.421638193 None None N
L/S 0.2166 likely_benign 0.2233 benign -1.666 Destabilizing 0.081 N 0.365 neutral None None None None N
L/T 0.156 likely_benign 0.1562 benign -1.532 Destabilizing 0.081 N 0.314 neutral None None None None N
L/V 0.0669 likely_benign 0.0631 benign -1.066 Destabilizing None N 0.109 neutral N 0.411903989 None None N
L/W 0.364 ambiguous 0.3421 ambiguous -1.18 Destabilizing 0.935 D 0.459 neutral None None None None N
L/Y 0.3308 likely_benign 0.3276 benign -0.966 Destabilizing 0.555 D 0.373 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.