Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17342 | 52249;52250;52251 | chr2:178609286;178609285;178609284 | chr2:179474013;179474012;179474011 |
N2AB | 15701 | 47326;47327;47328 | chr2:178609286;178609285;178609284 | chr2:179474013;179474012;179474011 |
N2A | 14774 | 44545;44546;44547 | chr2:178609286;178609285;178609284 | chr2:179474013;179474012;179474011 |
N2B | 8277 | 25054;25055;25056 | chr2:178609286;178609285;178609284 | chr2:179474013;179474012;179474011 |
Novex-1 | 8402 | 25429;25430;25431 | chr2:178609286;178609285;178609284 | chr2:179474013;179474012;179474011 |
Novex-2 | 8469 | 25630;25631;25632 | chr2:178609286;178609285;178609284 | chr2:179474013;179474012;179474011 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | None | N | 0.242 | 0.07 | 0.290222751274 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.075 | likely_benign | 0.0889 | benign | -0.869 | Destabilizing | None | N | 0.103 | neutral | N | 0.408606528 | None | None | N |
P/C | 0.4357 | ambiguous | 0.4968 | ambiguous | -0.543 | Destabilizing | 0.864 | D | 0.279 | neutral | None | None | None | None | N |
P/D | 0.3101 | likely_benign | 0.3733 | ambiguous | -0.892 | Destabilizing | 0.038 | N | 0.251 | neutral | None | None | None | None | N |
P/E | 0.2032 | likely_benign | 0.2395 | benign | -0.978 | Destabilizing | None | N | 0.209 | neutral | None | None | None | None | N |
P/F | 0.4702 | ambiguous | 0.5338 | ambiguous | -0.927 | Destabilizing | 0.12 | N | 0.341 | neutral | None | None | None | None | N |
P/G | 0.1946 | likely_benign | 0.2422 | benign | -1.057 | Destabilizing | 0.016 | N | 0.217 | neutral | None | None | None | None | N |
P/H | 0.2057 | likely_benign | 0.2463 | benign | -0.559 | Destabilizing | None | N | 0.202 | neutral | N | 0.460998218 | None | None | N |
P/I | 0.2718 | likely_benign | 0.3257 | benign | -0.498 | Destabilizing | 0.038 | N | 0.383 | neutral | None | None | None | None | N |
P/K | 0.2414 | likely_benign | 0.2909 | benign | -0.806 | Destabilizing | 0.016 | N | 0.227 | neutral | None | None | None | None | N |
P/L | 0.1282 | likely_benign | 0.1472 | benign | -0.498 | Destabilizing | None | N | 0.242 | neutral | N | 0.461171576 | None | None | N |
P/M | 0.2675 | likely_benign | 0.3215 | benign | -0.383 | Destabilizing | 0.12 | N | 0.285 | neutral | None | None | None | None | N |
P/N | 0.2535 | likely_benign | 0.3203 | benign | -0.491 | Destabilizing | 0.072 | N | 0.307 | neutral | None | None | None | None | N |
P/Q | 0.1595 | likely_benign | 0.1865 | benign | -0.753 | Destabilizing | 0.038 | N | 0.341 | neutral | None | None | None | None | N |
P/R | 0.1957 | likely_benign | 0.2208 | benign | -0.177 | Destabilizing | None | N | 0.157 | neutral | N | 0.441623024 | None | None | N |
P/S | 0.1159 | likely_benign | 0.1392 | benign | -0.828 | Destabilizing | 0.012 | N | 0.263 | neutral | N | 0.384534803 | None | None | N |
P/T | 0.098 | likely_benign | 0.1191 | benign | -0.82 | Destabilizing | 0.001 | N | 0.204 | neutral | N | 0.400237761 | None | None | N |
P/V | 0.1712 | likely_benign | 0.2101 | benign | -0.587 | Destabilizing | 0.016 | N | 0.227 | neutral | None | None | None | None | N |
P/W | 0.6039 | likely_pathogenic | 0.6736 | pathogenic | -1.036 | Destabilizing | 0.864 | D | 0.309 | neutral | None | None | None | None | N |
P/Y | 0.4183 | ambiguous | 0.4866 | ambiguous | -0.763 | Destabilizing | 0.214 | N | 0.367 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.