Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17347 | 52264;52265;52266 | chr2:178609271;178609270;178609269 | chr2:179473998;179473997;179473996 |
N2AB | 15706 | 47341;47342;47343 | chr2:178609271;178609270;178609269 | chr2:179473998;179473997;179473996 |
N2A | 14779 | 44560;44561;44562 | chr2:178609271;178609270;178609269 | chr2:179473998;179473997;179473996 |
N2B | 8282 | 25069;25070;25071 | chr2:178609271;178609270;178609269 | chr2:179473998;179473997;179473996 |
Novex-1 | 8407 | 25444;25445;25446 | chr2:178609271;178609270;178609269 | chr2:179473998;179473997;179473996 |
Novex-2 | 8474 | 25645;25646;25647 | chr2:178609271;178609270;178609269 | chr2:179473998;179473997;179473996 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs1488285179 | -1.818 | 0.667 | D | 0.727 | 0.794 | 0.631704462594 | gnomAD-2.1.1 | 4.63E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1E-05 | 0 |
Y/H | rs1488285179 | -1.818 | 0.667 | D | 0.727 | 0.794 | 0.631704462594 | gnomAD-4.0.0 | 1.69485E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.00645E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9926 | likely_pathogenic | 0.9932 | pathogenic | -2.262 | Highly Destabilizing | 0.272 | N | 0.82 | deleterious | None | None | None | None | N |
Y/C | 0.8685 | likely_pathogenic | 0.879 | pathogenic | -1.673 | Destabilizing | 0.958 | D | 0.895 | deleterious | D | 0.597936044 | None | None | N |
Y/D | 0.9941 | likely_pathogenic | 0.9944 | pathogenic | -2.932 | Highly Destabilizing | 0.859 | D | 0.884 | deleterious | D | 0.597936044 | None | None | N |
Y/E | 0.9973 | likely_pathogenic | 0.9976 | pathogenic | -2.686 | Highly Destabilizing | 0.726 | D | 0.853 | deleterious | None | None | None | None | N |
Y/F | 0.0702 | likely_benign | 0.0812 | benign | -0.744 | Destabilizing | None | N | 0.393 | neutral | D | 0.556616165 | None | None | N |
Y/G | 0.9866 | likely_pathogenic | 0.9873 | pathogenic | -2.717 | Highly Destabilizing | 0.726 | D | 0.843 | deleterious | None | None | None | None | N |
Y/H | 0.9157 | likely_pathogenic | 0.9186 | pathogenic | -1.971 | Destabilizing | 0.667 | D | 0.727 | prob.delet. | D | 0.59773424 | None | None | N |
Y/I | 0.8785 | likely_pathogenic | 0.8901 | pathogenic | -0.759 | Destabilizing | 0.157 | N | 0.765 | deleterious | None | None | None | None | N |
Y/K | 0.9957 | likely_pathogenic | 0.9963 | pathogenic | -1.93 | Destabilizing | 0.726 | D | 0.856 | deleterious | None | None | None | None | N |
Y/L | 0.8144 | likely_pathogenic | 0.8142 | pathogenic | -0.759 | Destabilizing | 0.072 | N | 0.731 | prob.delet. | None | None | None | None | N |
Y/M | 0.9417 | likely_pathogenic | 0.9515 | pathogenic | -0.826 | Destabilizing | 0.726 | D | 0.814 | deleterious | None | None | None | None | N |
Y/N | 0.9773 | likely_pathogenic | 0.9776 | pathogenic | -2.876 | Highly Destabilizing | 0.859 | D | 0.879 | deleterious | D | 0.597936044 | None | None | N |
Y/P | 0.9967 | likely_pathogenic | 0.9969 | pathogenic | -1.275 | Destabilizing | 0.89 | D | 0.895 | deleterious | None | None | None | None | N |
Y/Q | 0.9942 | likely_pathogenic | 0.995 | pathogenic | -2.425 | Highly Destabilizing | 0.89 | D | 0.789 | deleterious | None | None | None | None | N |
Y/R | 0.9867 | likely_pathogenic | 0.988 | pathogenic | -2.179 | Highly Destabilizing | 0.726 | D | 0.881 | deleterious | None | None | None | None | N |
Y/S | 0.9824 | likely_pathogenic | 0.9832 | pathogenic | -3.196 | Highly Destabilizing | 0.667 | D | 0.82 | deleterious | D | 0.597936044 | None | None | N |
Y/T | 0.9906 | likely_pathogenic | 0.9917 | pathogenic | -2.801 | Highly Destabilizing | 0.726 | D | 0.819 | deleterious | None | None | None | None | N |
Y/V | 0.8744 | likely_pathogenic | 0.8849 | pathogenic | -1.275 | Destabilizing | 0.157 | N | 0.75 | deleterious | None | None | None | None | N |
Y/W | 0.6011 | likely_pathogenic | 0.6262 | pathogenic | -0.134 | Destabilizing | 0.726 | D | 0.765 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.