Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17349 | 52270;52271;52272 | chr2:178609265;178609264;178609263 | chr2:179473992;179473991;179473990 |
N2AB | 15708 | 47347;47348;47349 | chr2:178609265;178609264;178609263 | chr2:179473992;179473991;179473990 |
N2A | 14781 | 44566;44567;44568 | chr2:178609265;178609264;178609263 | chr2:179473992;179473991;179473990 |
N2B | 8284 | 25075;25076;25077 | chr2:178609265;178609264;178609263 | chr2:179473992;179473991;179473990 |
Novex-1 | 8409 | 25450;25451;25452 | chr2:178609265;178609264;178609263 | chr2:179473992;179473991;179473990 |
Novex-2 | 8476 | 25651;25652;25653 | chr2:178609265;178609264;178609263 | chr2:179473992;179473991;179473990 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs1273982598 | -1.769 | 0.998 | N | 0.651 | 0.234 | 0.530509239904 | gnomAD-2.1.1 | 5.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 5.46E-05 | None | 0 | 0 | 0 |
I/M | rs1273982598 | -1.769 | 0.998 | N | 0.651 | 0.234 | 0.530509239904 | gnomAD-4.0.0 | 1.76556E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.75199E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9427 | likely_pathogenic | 0.9346 | pathogenic | -3.004 | Highly Destabilizing | 0.992 | D | 0.762 | deleterious | None | None | None | None | N |
I/C | 0.9589 | likely_pathogenic | 0.9582 | pathogenic | -2.025 | Highly Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
I/D | 0.9993 | likely_pathogenic | 0.9991 | pathogenic | -3.551 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
I/E | 0.9967 | likely_pathogenic | 0.9957 | pathogenic | -3.268 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
I/F | 0.8262 | likely_pathogenic | 0.7907 | pathogenic | -1.729 | Destabilizing | 0.998 | D | 0.668 | neutral | N | 0.483101986 | None | None | N |
I/G | 0.9905 | likely_pathogenic | 0.9879 | pathogenic | -3.569 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
I/H | 0.9981 | likely_pathogenic | 0.9975 | pathogenic | -3.023 | Highly Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
I/K | 0.9938 | likely_pathogenic | 0.9924 | pathogenic | -2.325 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
I/L | 0.2171 | likely_benign | 0.2079 | benign | -1.314 | Destabilizing | 0.889 | D | 0.387 | neutral | N | 0.470791137 | None | None | N |
I/M | 0.2997 | likely_benign | 0.2934 | benign | -1.315 | Destabilizing | 0.998 | D | 0.651 | neutral | N | 0.454655384 | None | None | N |
I/N | 0.9903 | likely_pathogenic | 0.9876 | pathogenic | -2.865 | Highly Destabilizing | 0.999 | D | 0.898 | deleterious | N | 0.484622923 | None | None | N |
I/P | 0.9958 | likely_pathogenic | 0.9943 | pathogenic | -1.868 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
I/Q | 0.9931 | likely_pathogenic | 0.9916 | pathogenic | -2.62 | Highly Destabilizing | 1.0 | D | 0.91 | deleterious | None | None | None | None | N |
I/R | 0.9909 | likely_pathogenic | 0.9891 | pathogenic | -2.115 | Highly Destabilizing | 1.0 | D | 0.906 | deleterious | None | None | None | None | N |
I/S | 0.9866 | likely_pathogenic | 0.9834 | pathogenic | -3.466 | Highly Destabilizing | 0.998 | D | 0.869 | deleterious | N | 0.484369434 | None | None | N |
I/T | 0.9774 | likely_pathogenic | 0.9718 | pathogenic | -3.044 | Highly Destabilizing | 0.989 | D | 0.764 | deleterious | N | 0.484115944 | None | None | N |
I/V | 0.1466 | likely_benign | 0.1398 | benign | -1.868 | Destabilizing | 0.333 | N | 0.333 | neutral | N | 0.447279559 | None | None | N |
I/W | 0.9961 | likely_pathogenic | 0.9948 | pathogenic | -2.155 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
I/Y | 0.9862 | likely_pathogenic | 0.9834 | pathogenic | -1.957 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.