Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17352 | 52279;52280;52281 | chr2:178609256;178609255;178609254 | chr2:179473983;179473982;179473981 |
N2AB | 15711 | 47356;47357;47358 | chr2:178609256;178609255;178609254 | chr2:179473983;179473982;179473981 |
N2A | 14784 | 44575;44576;44577 | chr2:178609256;178609255;178609254 | chr2:179473983;179473982;179473981 |
N2B | 8287 | 25084;25085;25086 | chr2:178609256;178609255;178609254 | chr2:179473983;179473982;179473981 |
Novex-1 | 8412 | 25459;25460;25461 | chr2:178609256;178609255;178609254 | chr2:179473983;179473982;179473981 |
Novex-2 | 8479 | 25660;25661;25662 | chr2:178609256;178609255;178609254 | chr2:179473983;179473982;179473981 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs1187111699 | None | 0.999 | D | 0.677 | 0.591 | 0.467416895013 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 0 |
E/K | None | None | 0.999 | N | 0.644 | 0.416 | 0.407632638399 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 6.17284E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2406 | likely_benign | 0.2176 | benign | -0.775 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | D | 0.527960369 | None | None | I |
E/C | 0.8777 | likely_pathogenic | 0.8741 | pathogenic | -0.238 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | I |
E/D | 0.5463 | ambiguous | 0.4795 | ambiguous | -1.015 | Destabilizing | 0.999 | D | 0.583 | neutral | N | 0.487240174 | None | None | I |
E/F | 0.8938 | likely_pathogenic | 0.8746 | pathogenic | -0.698 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
E/G | 0.419 | ambiguous | 0.3647 | ambiguous | -1.07 | Destabilizing | 1.0 | D | 0.747 | deleterious | N | 0.506104897 | None | None | I |
E/H | 0.6684 | likely_pathogenic | 0.638 | pathogenic | -0.983 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | I |
E/I | 0.4806 | ambiguous | 0.464 | ambiguous | 0.005 | Stabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | I |
E/K | 0.2422 | likely_benign | 0.2252 | benign | -0.285 | Destabilizing | 0.999 | D | 0.644 | neutral | N | 0.494519799 | None | None | I |
E/L | 0.6722 | likely_pathogenic | 0.6369 | pathogenic | 0.005 | Stabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
E/M | 0.573 | likely_pathogenic | 0.5455 | ambiguous | 0.48 | Stabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | I |
E/N | 0.6141 | likely_pathogenic | 0.5525 | ambiguous | -0.62 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | I |
E/P | 0.9957 | likely_pathogenic | 0.9932 | pathogenic | -0.234 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | I |
E/Q | 0.1433 | likely_benign | 0.1368 | benign | -0.565 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | D | 0.531096674 | None | None | I |
E/R | 0.3875 | ambiguous | 0.3732 | ambiguous | -0.203 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
E/S | 0.3223 | likely_benign | 0.2876 | benign | -0.88 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | I |
E/T | 0.2836 | likely_benign | 0.2538 | benign | -0.636 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | I |
E/V | 0.2774 | likely_benign | 0.2681 | benign | -0.234 | Destabilizing | 1.0 | D | 0.803 | deleterious | N | 0.509894683 | None | None | I |
E/W | 0.9653 | likely_pathogenic | 0.9583 | pathogenic | -0.557 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
E/Y | 0.8632 | likely_pathogenic | 0.8418 | pathogenic | -0.454 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.