Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17354 | 52285;52286;52287 | chr2:178609250;178609249;178609248 | chr2:179473977;179473976;179473975 |
N2AB | 15713 | 47362;47363;47364 | chr2:178609250;178609249;178609248 | chr2:179473977;179473976;179473975 |
N2A | 14786 | 44581;44582;44583 | chr2:178609250;178609249;178609248 | chr2:179473977;179473976;179473975 |
N2B | 8289 | 25090;25091;25092 | chr2:178609250;178609249;178609248 | chr2:179473977;179473976;179473975 |
Novex-1 | 8414 | 25465;25466;25467 | chr2:178609250;178609249;178609248 | chr2:179473977;179473976;179473975 |
Novex-2 | 8481 | 25666;25667;25668 | chr2:178609250;178609249;178609248 | chr2:179473977;179473976;179473975 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs886055269 | None | 0.051 | N | 0.272 | 0.06 | 0.252162846088 | gnomAD-4.0.0 | 3.64904E-06 | None | None | None | None | I | None | 0 | 3.25267E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 1.86164E-05 | 0 |
D/V | rs397517606 | 0.267 | 0.669 | N | 0.369 | 0.292 | 0.521015664611 | gnomAD-2.1.1 | 5.44E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.12E-05 | 0 |
D/Y | None | None | 0.966 | N | 0.345 | 0.325 | 0.642701035604 | gnomAD-4.0.0 | 1.82058E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.85625E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1541 | likely_benign | 0.1395 | benign | -0.071 | Destabilizing | 0.051 | N | 0.199 | neutral | N | 0.465621044 | None | None | I |
D/C | 0.626 | likely_pathogenic | 0.5828 | pathogenic | 0.048 | Stabilizing | 0.998 | D | 0.341 | neutral | None | None | None | None | I |
D/E | 0.2096 | likely_benign | 0.1822 | benign | -0.14 | Destabilizing | 0.051 | N | 0.272 | neutral | N | 0.464887538 | None | None | I |
D/F | 0.6311 | likely_pathogenic | 0.5852 | pathogenic | -0.22 | Destabilizing | 0.949 | D | 0.349 | neutral | None | None | None | None | I |
D/G | 0.2058 | likely_benign | 0.1814 | benign | -0.207 | Destabilizing | 0.454 | N | 0.33 | neutral | N | 0.491634209 | None | None | I |
D/H | 0.2916 | likely_benign | 0.2675 | benign | 0.163 | Stabilizing | 0.966 | D | 0.356 | neutral | N | 0.487440757 | None | None | I |
D/I | 0.3081 | likely_benign | 0.287 | benign | 0.221 | Stabilizing | 0.728 | D | 0.337 | neutral | None | None | None | None | I |
D/K | 0.3248 | likely_benign | 0.2926 | benign | 0.317 | Stabilizing | 0.842 | D | 0.345 | neutral | None | None | None | None | I |
D/L | 0.3799 | ambiguous | 0.3487 | ambiguous | 0.221 | Stabilizing | 0.016 | N | 0.305 | neutral | None | None | None | None | I |
D/M | 0.6007 | likely_pathogenic | 0.5663 | pathogenic | 0.183 | Stabilizing | 0.949 | D | 0.337 | neutral | None | None | None | None | I |
D/N | 0.1096 | likely_benign | 0.0986 | benign | 0.298 | Stabilizing | 0.051 | N | 0.338 | neutral | D | 0.525304066 | None | None | I |
D/P | 0.5488 | ambiguous | 0.5292 | ambiguous | 0.144 | Stabilizing | 0.974 | D | 0.355 | neutral | None | None | None | None | I |
D/Q | 0.3339 | likely_benign | 0.3081 | benign | 0.288 | Stabilizing | 0.949 | D | 0.316 | neutral | None | None | None | None | I |
D/R | 0.3418 | ambiguous | 0.3116 | benign | 0.504 | Stabilizing | 0.949 | D | 0.373 | neutral | None | None | None | None | I |
D/S | 0.119 | likely_benign | 0.1085 | benign | 0.131 | Stabilizing | 0.525 | D | 0.315 | neutral | None | None | None | None | I |
D/T | 0.189 | likely_benign | 0.1804 | benign | 0.228 | Stabilizing | 0.067 | N | 0.243 | neutral | None | None | None | None | I |
D/V | 0.2059 | likely_benign | 0.1923 | benign | 0.144 | Stabilizing | 0.669 | D | 0.369 | neutral | N | 0.501043126 | None | None | I |
D/W | 0.9058 | likely_pathogenic | 0.8899 | pathogenic | -0.187 | Destabilizing | 0.998 | D | 0.403 | neutral | None | None | None | None | I |
D/Y | 0.2738 | likely_benign | 0.2491 | benign | -0.003 | Destabilizing | 0.966 | D | 0.345 | neutral | N | 0.499215136 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.