Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17355 | 52288;52289;52290 | chr2:178609247;178609246;178609245 | chr2:179473974;179473973;179473972 |
N2AB | 15714 | 47365;47366;47367 | chr2:178609247;178609246;178609245 | chr2:179473974;179473973;179473972 |
N2A | 14787 | 44584;44585;44586 | chr2:178609247;178609246;178609245 | chr2:179473974;179473973;179473972 |
N2B | 8290 | 25093;25094;25095 | chr2:178609247;178609246;178609245 | chr2:179473974;179473973;179473972 |
Novex-1 | 8415 | 25468;25469;25470 | chr2:178609247;178609246;178609245 | chr2:179473974;179473973;179473972 |
Novex-2 | 8482 | 25669;25670;25671 | chr2:178609247;178609246;178609245 | chr2:179473974;179473973;179473972 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/D | rs2055715611 | None | 1.0 | N | 0.633 | 0.515 | 0.430351802785 | gnomAD-4.0.0 | 7.24267E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.42625E-05 | 0 |
H/N | None | None | 0.999 | N | 0.639 | 0.48 | 0.406394481233 | gnomAD-4.0.0 | 1.44854E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.8525E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.6142 | likely_pathogenic | 0.5756 | pathogenic | 0.491 | Stabilizing | 0.999 | D | 0.596 | neutral | None | None | None | None | I |
H/C | 0.2465 | likely_benign | 0.2201 | benign | 0.674 | Stabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | I |
H/D | 0.7141 | likely_pathogenic | 0.6738 | pathogenic | 0.003 | Stabilizing | 1.0 | D | 0.633 | neutral | N | 0.492440733 | None | None | I |
H/E | 0.744 | likely_pathogenic | 0.6852 | pathogenic | -0.007 | Destabilizing | 0.999 | D | 0.638 | neutral | None | None | None | None | I |
H/F | 0.4556 | ambiguous | 0.4064 | ambiguous | 0.831 | Stabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | I |
H/G | 0.7149 | likely_pathogenic | 0.6717 | pathogenic | 0.288 | Stabilizing | 0.999 | D | 0.594 | neutral | None | None | None | None | I |
H/I | 0.6691 | likely_pathogenic | 0.5927 | pathogenic | 0.977 | Stabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
H/K | 0.5161 | ambiguous | 0.4742 | ambiguous | 0.459 | Stabilizing | 1.0 | D | 0.624 | neutral | None | None | None | None | I |
H/L | 0.3288 | likely_benign | 0.2706 | benign | 0.977 | Stabilizing | 1.0 | D | 0.639 | neutral | N | 0.476451326 | None | None | I |
H/M | 0.7425 | likely_pathogenic | 0.7 | pathogenic | 0.732 | Stabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | I |
H/N | 0.3204 | likely_benign | 0.2841 | benign | 0.442 | Stabilizing | 0.999 | D | 0.639 | neutral | N | 0.519474171 | None | None | I |
H/P | 0.8815 | likely_pathogenic | 0.8399 | pathogenic | 0.839 | Stabilizing | 1.0 | D | 0.653 | neutral | N | 0.503961622 | None | None | I |
H/Q | 0.4982 | ambiguous | 0.4346 | ambiguous | 0.463 | Stabilizing | 1.0 | D | 0.683 | prob.neutral | D | 0.523514554 | None | None | I |
H/R | 0.2397 | likely_benign | 0.2093 | benign | 0.04 | Stabilizing | 1.0 | D | 0.66 | neutral | N | 0.485603878 | None | None | I |
H/S | 0.5378 | ambiguous | 0.5103 | ambiguous | 0.515 | Stabilizing | 1.0 | D | 0.621 | neutral | None | None | None | None | I |
H/T | 0.6478 | likely_pathogenic | 0.6145 | pathogenic | 0.595 | Stabilizing | 1.0 | D | 0.646 | neutral | None | None | None | None | I |
H/V | 0.583 | likely_pathogenic | 0.5193 | ambiguous | 0.839 | Stabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | I |
H/W | 0.6314 | likely_pathogenic | 0.5935 | pathogenic | 0.681 | Stabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
H/Y | 0.1915 | likely_benign | 0.1605 | benign | 1.02 | Stabilizing | 0.999 | D | 0.584 | neutral | N | 0.515452431 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.