Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17358 | 52297;52298;52299 | chr2:178609238;178609237;178609236 | chr2:179473965;179473964;179473963 |
N2AB | 15717 | 47374;47375;47376 | chr2:178609238;178609237;178609236 | chr2:179473965;179473964;179473963 |
N2A | 14790 | 44593;44594;44595 | chr2:178609238;178609237;178609236 | chr2:179473965;179473964;179473963 |
N2B | 8293 | 25102;25103;25104 | chr2:178609238;178609237;178609236 | chr2:179473965;179473964;179473963 |
Novex-1 | 8418 | 25477;25478;25479 | chr2:178609238;178609237;178609236 | chr2:179473965;179473964;179473963 |
Novex-2 | 8485 | 25678;25679;25680 | chr2:178609238;178609237;178609236 | chr2:179473965;179473964;179473963 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.235 | N | 0.347 | 0.289 | 0.480123561213 | gnomAD-4.0.0 | 7.2825E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.32151E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5419 | ambiguous | 0.5573 | ambiguous | -0.866 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
A/D | 0.5719 | likely_pathogenic | 0.528 | ambiguous | -0.946 | Destabilizing | 0.999 | D | 0.857 | deleterious | None | None | None | None | I |
A/E | 0.5109 | ambiguous | 0.4926 | ambiguous | -1.021 | Destabilizing | 0.997 | D | 0.825 | deleterious | N | 0.485074127 | None | None | I |
A/F | 0.5914 | likely_pathogenic | 0.5793 | pathogenic | -0.79 | Destabilizing | 0.998 | D | 0.873 | deleterious | None | None | None | None | I |
A/G | 0.2744 | likely_benign | 0.281 | benign | -0.733 | Destabilizing | 0.989 | D | 0.578 | neutral | N | 0.500940337 | None | None | I |
A/H | 0.7167 | likely_pathogenic | 0.7112 | pathogenic | -0.694 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
A/I | 0.4393 | ambiguous | 0.4332 | ambiguous | -0.293 | Destabilizing | 0.966 | D | 0.736 | prob.delet. | None | None | None | None | I |
A/K | 0.7079 | likely_pathogenic | 0.6886 | pathogenic | -1.119 | Destabilizing | 0.998 | D | 0.825 | deleterious | None | None | None | None | I |
A/L | 0.3519 | ambiguous | 0.3657 | ambiguous | -0.293 | Destabilizing | 0.966 | D | 0.598 | neutral | None | None | None | None | I |
A/M | 0.4094 | ambiguous | 0.4218 | ambiguous | -0.437 | Destabilizing | 0.999 | D | 0.804 | deleterious | None | None | None | None | I |
A/N | 0.5701 | likely_pathogenic | 0.5715 | pathogenic | -0.884 | Destabilizing | 0.999 | D | 0.873 | deleterious | None | None | None | None | I |
A/P | 0.9768 | likely_pathogenic | 0.97 | pathogenic | -0.346 | Destabilizing | 0.999 | D | 0.845 | deleterious | N | 0.497572975 | None | None | I |
A/Q | 0.5111 | ambiguous | 0.5167 | ambiguous | -1.083 | Destabilizing | 0.999 | D | 0.842 | deleterious | None | None | None | None | I |
A/R | 0.6275 | likely_pathogenic | 0.6108 | pathogenic | -0.636 | Destabilizing | 0.999 | D | 0.849 | deleterious | None | None | None | None | I |
A/S | 0.1253 | likely_benign | 0.1296 | benign | -1.115 | Destabilizing | 0.989 | D | 0.591 | neutral | D | 0.534945056 | None | None | I |
A/T | 0.135 | likely_benign | 0.1341 | benign | -1.104 | Destabilizing | 0.977 | D | 0.681 | prob.neutral | N | 0.496559017 | None | None | I |
A/V | 0.2286 | likely_benign | 0.2193 | benign | -0.346 | Destabilizing | 0.235 | N | 0.347 | neutral | N | 0.482414327 | None | None | I |
A/W | 0.9191 | likely_pathogenic | 0.9185 | pathogenic | -1.05 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
A/Y | 0.735 | likely_pathogenic | 0.7328 | pathogenic | -0.678 | Destabilizing | 0.999 | D | 0.869 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.