Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17361 | 52306;52307;52308 | chr2:178609229;178609228;178609227 | chr2:179473956;179473955;179473954 |
N2AB | 15720 | 47383;47384;47385 | chr2:178609229;178609228;178609227 | chr2:179473956;179473955;179473954 |
N2A | 14793 | 44602;44603;44604 | chr2:178609229;178609228;178609227 | chr2:179473956;179473955;179473954 |
N2B | 8296 | 25111;25112;25113 | chr2:178609229;178609228;178609227 | chr2:179473956;179473955;179473954 |
Novex-1 | 8421 | 25486;25487;25488 | chr2:178609229;178609228;178609227 | chr2:179473956;179473955;179473954 |
Novex-2 | 8488 | 25687;25688;25689 | chr2:178609229;178609228;178609227 | chr2:179473956;179473955;179473954 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 0.001 | N | 0.201 | 0.116 | 0.225215365344 | gnomAD-4.0.0 | 1.86637E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.23532E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0668 | likely_benign | 0.06 | benign | -1.155 | Destabilizing | 0.003 | N | 0.204 | neutral | N | 0.439973238 | None | None | I |
P/C | 0.3417 | ambiguous | 0.3024 | benign | -0.693 | Destabilizing | 0.002 | N | 0.355 | neutral | None | None | None | None | I |
P/D | 0.3742 | ambiguous | 0.3394 | benign | -0.905 | Destabilizing | 0.228 | N | 0.348 | neutral | None | None | None | None | I |
P/E | 0.2372 | likely_benign | 0.2134 | benign | -0.976 | Destabilizing | 0.228 | N | 0.353 | neutral | None | None | None | None | I |
P/F | 0.3985 | ambiguous | 0.3385 | benign | -1.148 | Destabilizing | 0.836 | D | 0.594 | neutral | None | None | None | None | I |
P/G | 0.2472 | likely_benign | 0.2206 | benign | -1.393 | Destabilizing | 0.129 | N | 0.357 | neutral | None | None | None | None | I |
P/H | 0.1756 | likely_benign | 0.154 | benign | -0.999 | Destabilizing | 0.794 | D | 0.53 | neutral | N | 0.456097483 | None | None | I |
P/I | 0.2362 | likely_benign | 0.2047 | benign | -0.632 | Destabilizing | 0.418 | N | 0.51 | neutral | None | None | None | None | I |
P/K | 0.2615 | likely_benign | 0.2355 | benign | -0.902 | Destabilizing | 0.129 | N | 0.353 | neutral | None | None | None | None | I |
P/L | 0.1209 | likely_benign | 0.1043 | benign | -0.632 | Destabilizing | 0.101 | N | 0.387 | neutral | N | 0.456270842 | None | None | I |
P/M | 0.2566 | likely_benign | 0.2298 | benign | -0.386 | Destabilizing | 0.94 | D | 0.534 | neutral | None | None | None | None | I |
P/N | 0.2283 | likely_benign | 0.2011 | benign | -0.545 | Destabilizing | 0.264 | N | 0.452 | neutral | None | None | None | None | I |
P/Q | 0.1488 | likely_benign | 0.1337 | benign | -0.801 | Destabilizing | 0.418 | N | 0.533 | neutral | None | None | None | None | I |
P/R | 0.1691 | likely_benign | 0.1527 | benign | -0.345 | Destabilizing | 0.351 | N | 0.555 | neutral | N | 0.46277274 | None | None | I |
P/S | 0.0853 | likely_benign | 0.0772 | benign | -0.99 | Destabilizing | 0.001 | N | 0.201 | neutral | N | 0.377441912 | None | None | I |
P/T | 0.0801 | likely_benign | 0.0723 | benign | -0.959 | Destabilizing | 0.001 | N | 0.199 | neutral | N | 0.412709279 | None | None | I |
P/V | 0.159 | likely_benign | 0.1412 | benign | -0.771 | Destabilizing | 0.129 | N | 0.381 | neutral | None | None | None | None | I |
P/W | 0.6037 | likely_pathogenic | 0.5495 | ambiguous | -1.262 | Destabilizing | 0.983 | D | 0.517 | neutral | None | None | None | None | I |
P/Y | 0.3562 | ambiguous | 0.3055 | benign | -0.978 | Destabilizing | 0.94 | D | 0.567 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.