Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17366 | 52321;52322;52323 | chr2:178609214;178609213;178609212 | chr2:179473941;179473940;179473939 |
N2AB | 15725 | 47398;47399;47400 | chr2:178609214;178609213;178609212 | chr2:179473941;179473940;179473939 |
N2A | 14798 | 44617;44618;44619 | chr2:178609214;178609213;178609212 | chr2:179473941;179473940;179473939 |
N2B | 8301 | 25126;25127;25128 | chr2:178609214;178609213;178609212 | chr2:179473941;179473940;179473939 |
Novex-1 | 8426 | 25501;25502;25503 | chr2:178609214;178609213;178609212 | chr2:179473941;179473940;179473939 |
Novex-2 | 8493 | 25702;25703;25704 | chr2:178609214;178609213;178609212 | chr2:179473941;179473940;179473939 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.977 | D | 0.706 | 0.759 | 0.784753558091 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
V/M | None | None | 0.993 | D | 0.831 | 0.608 | 0.7613135738 | gnomAD-4.0.0 | 1.47234E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.58128E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9716 | likely_pathogenic | 0.9716 | pathogenic | -2.126 | Highly Destabilizing | 0.977 | D | 0.706 | prob.neutral | D | 0.595534035 | None | None | N |
V/C | 0.9884 | likely_pathogenic | 0.9889 | pathogenic | -1.852 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
V/D | 0.999 | likely_pathogenic | 0.9988 | pathogenic | -3.004 | Highly Destabilizing | 0.999 | D | 0.818 | deleterious | None | None | None | None | N |
V/E | 0.9971 | likely_pathogenic | 0.9967 | pathogenic | -2.904 | Highly Destabilizing | 0.999 | D | 0.801 | deleterious | D | 0.596139448 | None | None | N |
V/F | 0.9597 | likely_pathogenic | 0.9573 | pathogenic | -1.382 | Destabilizing | 0.995 | D | 0.794 | deleterious | None | None | None | None | N |
V/G | 0.9872 | likely_pathogenic | 0.9859 | pathogenic | -2.513 | Highly Destabilizing | 0.999 | D | 0.791 | deleterious | D | 0.596139448 | None | None | N |
V/H | 0.999 | likely_pathogenic | 0.9989 | pathogenic | -1.96 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
V/I | 0.1123 | likely_benign | 0.1174 | benign | -1.089 | Destabilizing | 0.15 | N | 0.581 | neutral | None | None | None | None | N |
V/K | 0.9978 | likely_pathogenic | 0.9976 | pathogenic | -1.764 | Destabilizing | 0.998 | D | 0.802 | deleterious | None | None | None | None | N |
V/L | 0.9076 | likely_pathogenic | 0.9051 | pathogenic | -1.089 | Destabilizing | 0.898 | D | 0.707 | prob.neutral | D | 0.593515992 | None | None | N |
V/M | 0.917 | likely_pathogenic | 0.9127 | pathogenic | -1.155 | Destabilizing | 0.993 | D | 0.831 | deleterious | D | 0.595735839 | None | None | N |
V/N | 0.9937 | likely_pathogenic | 0.9929 | pathogenic | -1.912 | Destabilizing | 0.999 | D | 0.83 | deleterious | None | None | None | None | N |
V/P | 0.9928 | likely_pathogenic | 0.9937 | pathogenic | -1.409 | Destabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | N |
V/Q | 0.997 | likely_pathogenic | 0.9968 | pathogenic | -1.991 | Destabilizing | 0.999 | D | 0.812 | deleterious | None | None | None | None | N |
V/R | 0.9954 | likely_pathogenic | 0.9952 | pathogenic | -1.309 | Destabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | N |
V/S | 0.9847 | likely_pathogenic | 0.983 | pathogenic | -2.397 | Highly Destabilizing | 0.998 | D | 0.783 | deleterious | None | None | None | None | N |
V/T | 0.9387 | likely_pathogenic | 0.9329 | pathogenic | -2.193 | Highly Destabilizing | 0.983 | D | 0.777 | deleterious | None | None | None | None | N |
V/W | 0.9997 | likely_pathogenic | 0.9996 | pathogenic | -1.72 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
V/Y | 0.9973 | likely_pathogenic | 0.9972 | pathogenic | -1.455 | Destabilizing | 0.999 | D | 0.792 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.